Detailed information on CNT30283167


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550233Chenopodium quinoaIpomoea triloba73.6567.2295.361895forward
CNT30542906Chenopodium quinoaBrassica napus65.5799.3595.441687forward
CNT30311297Chenopodium quinoaCamelina sativa78.43100.293.712018forward
CNT3060563Chenopodium quinoaArabidopsis lyrata85.46100.3795.362199reverse complement
CNT30217525Chenopodium quinoaKalanchoe fedtschenkoi68.7198.5591.861768forward
CNT3023562Chenopodium quinoaPopulus trichocarpa86.6399.8795.512229reverse complement

Expression of CNT30283167

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 2 (40 aa)
MNRKPGYGAQLRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 3 (40 aa)
MPLLLDLRSALRADPGGGHCQVGSLAGAAHLLKDNAGVLR*

>peptide 4 (37 aa)
MPERAKPEETLVEARSDTDVQIVRLTWCIGRKTNRTV*

>peptide 5 (35 aa)
MVIQPSTRGTVDSHNWSSRLVEKPVARSYRVLDYD*

>peptide 6 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 7 (98 aa)
MEQCRQGKSAKWIRNFGKRIGSEGWARGSQSRTRRLSADCSSCFRGESGSPRAGRGTDWERSLRGPSPGVEQSTQNWYGQGESDCLIKTKHCDGPCGC*

Sequence

>CNT30283167
AGATGGTGAACTATGCCTGAGCGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGAAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGTGTATAG
GGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCATTCGCGAGTTCTATCAGGTAAAGCCAATGA
TTAGAGGCCTCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGTGCCATGGAATCGAGAGC
TCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTACGCGCTAACCTAGATCCCACAAAGG
GTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATG
GATGGCGCTGAAGCGCGTGACCTATACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCAGCGGTCGCTGCAAAACCTGTGGCGTGA
GCCAGGGCGGAGCGGCCGTTGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGG
CACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCTGTCCGATAGCGCGTTTCGCGCGAGCTTCGAAAGGGAATCGGGTTAAAATTCCTGAA
CCGGGACGTGGCGGTTGACGGCAACGTTAGGAAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGG
AATCGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTTTTGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCG
AGTGCCGACCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAAT
GGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGCGGACTGCTCGAGCTGCTTCCG
TGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTCCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTAC
GGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGTTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAA
GTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATG
GATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGC
TTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTA
CTCCGTGAGTCGGAAGCGGGGCAATGCCCCTCCTTTTAGACCTAAGGTCCGCTTTGCGGGCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTGGC
TGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGAT
TCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTTTGAATTTAAAGCTAGAGGTGTCAGAAAAGTTACCACAGGG
ATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTT
GGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATGGTAATTCAA
CCTAGTACGAGAGGAACCGTTGATTCACACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGC
CTCTAAGTCAGAATCCGGGCCAGAAGCGACGCATGCGCCCGCCGCCCGATTGCCGTCCTACAGTAGGGGCTTCGGCCCCAAGGGCATGTGTCGTAGGCTA
AGCTCGCGCGGCGGATGCGCCGTGAGAGCCGCCTTGAAGTACAATTCCTACCGAGCGGCGGGTTGAATCCTTTGCAGACGACTTAAATACGCGACGGGGT
ATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTATGTCGCTTCGATTCGTCCTC