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Detailed information on CNT30283133


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698389Chenopodium quinoaQuercus lobata85.4947.6990.58701reverse complement
CNT30500291Chenopodium quinoaCoffea canephora85.4951.6689.59701forward
CNT30618591Chenopodium quinoaSesamum indicum55.6162.1395.61456forward
CNT30730547Chenopodium quinoaCorchorus capsularis85.4961.2891.44701forward
CNT30639035Chenopodium quinoaCapsicum annuum85.2456.4691.13699forward
CNT30383121Chenopodium quinoaTriticum turgidum56.4684.4992.87463forward
CNT3089447Chenopodium quinoaVigna radiata59.6345.8792.02489forward
CNT30424816Chenopodium quinoaPapaver somniferum85.6152.990.88702forward

Expression of CNT30283133

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MQPQVGGKFRPRLNTGERPIANNYREGKMKRTLKRESKSA*

>peptide 2 (46 aa)
MGAGDAPRSDVERPKAGPPIGSGCGPTRIGGRLNPGFPGASSPRSW*

Sequence

>CNT30283133
GTTACGAAGTGCCGCGGCAATAGGTGGTAGACAAGGCCTAGCCTAGGATGCATCGGAGTCGCGCACTTTGTAGCTCTTGAGGACTCGCAGGACCCTTAGT
TTGTTCGCCCTTAGGGACGGCAAAACCGTTGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTAC
AAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCTTTAAAATCGGGCGGCTTCGTCGTCCGAATTGTAGTCTGGAGAAGCGTCCTCTGCG
GCGGACCGGGCCCAAGTCCCCTGGAAAGGGGCTGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGCCGAGTCG
GGTTGTTTGGGAATGCAGCCCCAAGTGGGCGGTAAATTCCGTCCAAGGCTAAATACTGGCGAGAGACCGATAGCGAACAATTACCGCGAGGGAAAGATGA
AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGTCGGATGTGGAACGGCCAAAA
GCCGGTCCGCCGATCGGCTCGGGGTGCGGACCGACGCGGATTGGAGGGCGGCTAAACCCCGGTTTTCCGGGAGCGTCGTCCCCTCGATCGTGGTAGGCAG
CGCGCGCCGTCACGGCGTGCTTCGGCACCTGCGCGCTCCAGGCGTCGGCCTGCGGGCCCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGAC
ATGTGTGCGAGTCAACGGCG