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Detailed information on CNT30283076


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT000710, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639077Chenopodium quinoaCapsicum annuum74.0960.7495.171015forward
CNT30719706Chenopodium quinoaMalus domestica golden79.9394.4894.611095forward

Expression of CNT30283076

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MSALPIIVKQNSPSVGLFTTNRERELGLDRRETG*

>peptide 2 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 3 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 4 (44 aa)
MRPPPDCRPTVGASAPKGTCRRLSSRGGCAVRAALKYNSYRAAG*

>peptide 5 (40 aa)
MPLLLDLRSALRADPGGGHCQVGSLAGAAHLLKDNAGVLR*

>peptide 6 (35 aa)
MVIQPSTRGTVDSHNWSSRLVEKPVARSYRVLDYD*

>peptide 7 (37 aa)
SGFPGVEQSTQNWYGQGESDCLIKTSIAMVPADVNAM*

>peptide 8 (40 aa)
MLTQCDFCQCSECQSEEFNQARVNGGSNYDSLKVAKCLVI*

Sequence

>CNT30283076
CTTCGGGCTTCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAGCATTGCGATGGTCCCTGCGGA
TGTTAACGCAATGTGATTTCTGCCAGTGCTCTGAATGTCAAAGTGAAGAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGT
AGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAAC
GGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTTCG
GCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAGTCGGAAGCGGGGCAATGCCCCTCCTTTTAGACCTAAGGTCCGCTTTGCGG
GCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAAC
AGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTT
TTGAATTTAAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGT
CGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTA
GTTTTACCCTACTGATGACAGTGTCGCAATGGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGTCATCGCGCTTGGTTGAAAAGCCA
GTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCCAGAAGCGACGCATGCGCCCGCCGCCCGATTGCCGTCCTA
CAGTAGGGGCTTCGGCCCCCAAGGGCACGTGTCGTAGGCTAAGCTCGCGCGGCGGATGCGCCGTGAGAGCCGCCTTGAAGTACAATTCCTACCGAGCGGC
GGGTTGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTATGTCGC
TTCGATTCGTCCCTCCCCTCCATCCTATTCCCTAAAAACACCTATATTTTGGAAAACGAGGTTAGCGTTG