Detailed information on CNT30282953


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632211Chenopodium quinoaVigna unguiculata16.1820.0788.5261reverse complement
CNT30145515Chenopodium quinoaMedicago truncatula14.3222.0488.8954reverse complement
CNT30120512Chenopodium quinoaCitrus clementina16.4520.7487.162reverse complement

Expression of CNT30282953

Peptides detected in this lncRNA

>peptide 1 (64 aa)
IHFTSPSLFQRFASSVKKKKTFLLQTPPPHSPPPHFPQPSPTVPPPQFLQTVAAASPSKCRTKP*

>peptide 2 (78 aa)
SFHFSLPLSTFCFFCEKKKNVLASNSTTTLSTTSLSTTIADRSSASVSTNGRRSLTIEVQDETLNRFDGYSNGNRIGC*

Sequence

>CNT30282953
ATTCATTTCACTTCTCCCTCCCTCTTTCAACGTTTTGCTTCTTCTGTGAAAAAAAAAAAAACGTTCTTGCTTCAAACTCCACCACCACACTCTCCACCAC
CTCACTTTCCACAACCATCGCCGACCGTTCCTCCGCCTCAGTTTCTACAAACGGTCGCCGCAGCCTCACCATCGAAGTGCAGGACGAAACCCTAAACAGG
TTTGACGGCTACAGCAACGGGAACCGGATTGGCTGCTGAAATCATCGGTACATTCGTTCTTGTCTAGACGGTCTTCTCCGCCACTGACCACGGCCGTATC
TGGGCAGGGCAACCGTATCTGGCCCCAAATCAAAAGCCCAGTTTTTCATTAAACTGAAAAGGCCTAATTAATTAAGG