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Detailed information on CNT30281985


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LKP7|CHSY_DIAMO, E-value = 0.0

BLAST vs NONCODE:
NONCQUT002173, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30485883Chenopodium quinoaOlea europaea2.8523.4589.7168forward
CNT3045136Chenopodium quinoaPrunus dulcis15.2158.3679.89363forward
CNT30156272Chenopodium quinoaPistacia vera13.9521.679.28333forward
CNT3096085Chenopodium quinoaSolanum tuberosum7.6238.2480.77182forward
CNT30192533Chenopodium quinoaSecale cereale9.0132.1980215forward
CNT30564019Chenopodium quinoaActinidia chinensis8.4227.1380.6201forward
CNT3074040Chenopodium quinoaBrassica juncea7.5840.9583.98181forward
CNT30597791Chenopodium quinoaFraxinus excelsior2.8522.7488.2468forward
CNT30469647Chenopodium quinoaSaccharum spontaneum4.2350.584.16101forward
CNT30610059Chenopodium quinoaGossypium raimondii14.1249.3479.23337forward
CNT30365392Chenopodium quinoaSorghum bicolor10.3942.7678.63248forward
CNT30355776Chenopodium quinoaLactuca sativa9.7640.1784.12233forward
CNT30151821Chenopodium quinoaPrunus persica15.3763.7280.11367forward
CNT30114125Chenopodium quinoaFicus carica8.8427.3379.15211forward

Expression of CNT30281985

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MNKTQALDILPKSRNTLRVAVSFSSSRIAGPPG*

>peptide 2 (29 aa)
MSDPKERVPIINSKGFKCVLEGLVNILRN*

>peptide 3 (29 aa)
FIITRTSLFESHNSNRYRHTVVLCSISVQ*

>peptide 4 (68 aa)
MSTPEVVHMITWVILDLGCPHSLIALTAASLPSLGTSATTMSCLVSSDEPMYSHMFGFSLSMSSVKYM*

>peptide 5 (50 aa)
MLTLSNTKVIIRIISLINTIGWSGGTNSQDRGRSIGTLSLADFIKGSHLS*

>peptide 6 (35 aa)
MGDLGLRLPPFLNSLDRGFFAEPRDFGNHHVLSSV*

>peptide 7 (73 aa)
MDHWKIIIIITSTINELRNKSSRIIADIVANLTATHVLWGRHPKTTSIGQRNTVKDNSFYGEAGTKPEQNTPV*

Sequence

>CNT30281985
TTCATAATAACAAGGACGTCTCTTTTTGAAAGTCACAATAGTAATAGATACAGACATACAGTAGTATTGTGTTCCATTTCCGTACAATAAAAATAACCAT
AACAAACACGTAAATATTAATTAAGAATACTATAAATAAATTACATTGGAATGGACCACTGGAAGATAATAATAATAATTACTAGTACTATAAATGAATT
ACGTAACAAAAGTAGTAGAATCATAGCAGATATTGTGGCAAATTTAACTGCCACTCATGTTTTATGGGGTAGACATCCAAAAACAACTTCAATAGGTCAA
AGGAACACTGTGAAGGACAACAGTTTCTACGGTGAGGCCGGGACCAAACCCGAACAAAACACCCCAGTCTAGCCCATCGCCAGTAGTCGATTTCCCTTCC
TTGGACGACTTCTTCCTCATCTCGTCTAGGATGAATAAAACACAAGCACTCGACATATTACCAAAGTCACGTAACACGTTACGTGTGGCGGTAAGTTTTT
CTTCGTCTAGAATAGCGGGACCACCAGGATGAGCGATCCAAAAGAGAGAGTTCCAATCATCAATTCCAAGGGGTTTAAATGCGTCCTCGAGGGCCTTGTT
AATATTCTTAGAAATTAGGCCAGGAACATCTTTCAGTAGATGAAAAGTCAGGCCCACTTCACGCAAGTGTCCATCAATTGCACCCTCAGAGTCGGGGAGT
AAAGTTTGGGCTGCCCACACCATCTTAAATAAAGGCCGCTCAATGGACTCTACTGGATCAGCACCGACAATCATCGCTCCAGCCCCATCCCCAAAAAGGG
CCTGGCCCACCATTGAGTCCAAGTGAGTCTCAGTAGGCCCACGGAAACAAATAGCCGTGATCTCAGAACAAACCACAAGGACTCTAGCCCCGCGGTTGTT
CTCCGCAAGGTCCTTGGCGAGACGGAGGACCGTCCCGCCAGCAAAGCAACCTTGTTGGTAGAGCATGAAGCGGCGAACAGAAGGGCGTAGGCCGAGGAGC
TTAGTGAGCTGGTAGTCCGCCCCTGGCATGTCAACACCGGAGGTGGTGCACATGATAACATGGGTGATCTTGGACTTAGGCTGCCCCCATTCCTTAATAG
CCTTGACCGCGGCTTCTTTGCCGAGCCTAGGGACTTCGGCAACCACCATGTCTTGTCTAGTGTCTAGTGATGAGCCCATGTACTCGCACATGTTTGGTTT
CTCCTTGAGTATGTCTTCTGTCAAGTACATGTAACGTTTCTTGATCATTGATTTGTCACCTATAAAATTTAATAACGGCAAAATTTATAAGGTTAGTACA
ATTTAAGGCGTATCCTTTAATTTAATTTAGGAGACAGGCTTAATAATTATATAAAAAAAAAAAATTGTGTACCTCTTATTTCTTTAGTTTCATTTTACTC
GTCTTACATAAATCTTGTACAGTTTTTAAATAAATGGGATAAGTAAATTGAAATGGAAGAAGTATATACCAACGAGATTCCATATATTGGGAAATTAAAA
GTGCGCTTTTAGGATATTGTTTAAACTCATTAGTCATTTTTCTGCTAAATTAAAATAATTAGATAAGCACACTCTTTGCATGCAACTATGCAAGTTCCTA
AGGAAACTCAGTCAAATTTGTCTCTCCTCAAATTTTACATAAATCTTTGCCAAATAAAATTCTTCTACGCTTAATATTATACAGTAGACATTATAGATGT
TTGCTGAATCTATCCACAATCTTATATTTCTTTAATAATTTCTTGGAATATAATTGTCTAATCACAATATAATTCAAGCTTGTGGATCAATTAGTGTATT
AATATTAATATGAAGATATTGCATGTTAAAACAAATAAAACCATCCAGTGCATCATTTCATTTTCATTTTCCACAAAAGATATATAATATAATGTATAAA
TTATAAACATCAACAAAATTAATAAATGCGATGAGCTAAAATGAGTATATATAAAAAAAACAGACTTACACATGCGCCTAAATTTCTCCTTTAAATCAGT
CATATGCTCACTCTTAGTAACACGAAAGTAATAATCCGGATAATCAGCTTGATAAACACAATTGGGTGGAGTGGCGGTACCAATAGCCAAGATCGCGGCC
GGTCCATCGGCACGCTGAGCTTGGCGGATTTCATCAAGGGAAGCCATTTAAGCTAGATACCTTGCACAACAACGTTCCCTAGCAAAACTATAAAGCTAAG
AGAATATATACTAGATAAAACTTATCTTAATCAGAGTACTTAGCCTATATATATATAGTGTAGCACTTTGTGAGTATTTTTATATAATATAATTAGAATT
TAAGAAGAAGGTTAGTTGGAGAAAGTTAAGTAAGAAAATGATAGAGATTAGAGAAAGAAGAGCACGTCGACAGAGTTCCAATAGTAT