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Detailed information on CNT30281593


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONPOPT000803, E-value = 3e-32

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30562752Chenopodium quinoaActinidia chinensis23.5710.1282.81128forward
CNT30360489Chenopodium quinoaLactuca sativa22.6511.3382.11123forward

Expression of CNT30281593

Peptides detected in this lncRNA

>peptide 1 (69 aa)
LASILPGDTSKPLNSQSTKSSQHSPSAMNQLTLPEPLKPKNLTVWLQSCGLNILRLGPGPNNVTSQILG*

>peptide 2 (47 aa)
MGRTHNHLLSSHLNILGPWHQGTIMGVPMKDEVAAAEAEAEAMFDFI*

Sequence

>CNT30281593
CTTGCCAGCATCTTGCCAGGTGACACCAGTAAGCCACTCAACAGTCAGAGCACCAAGAGTAGCCAACATAGCCCATCTGCCATGAATCAGCTCACACTCC
CTGAACCTCTGAAGCCCAAAAACCTCACTGTATGGCTGCAAAGCTGTGGACTTAACATCCTCCGACTCGGTCCGGGTCCCAATAATGTCACCAGCCAAAT
TCTTGGCTAAGTTCTGGTCCAAACCATCATAGTCATATTGTAAATACTCAGCAGGCTTTCCTAGCCCAAATGGGTCGAACCCATAATCACCTACTAAGCT
CCCATCTAAATATTCTGGGGCCTTGGCACCAGGGTACCATAATGGGCGTCCCGATGAAAGATGAGGTGGCAGCAGCCGAGGCCGAGGCCGAAGCCATGTT
TGATTTTATTTAGTTGTTAGATGGATTGGTGGTGGTTATGGGAGGTGTGTTGAGAGTTTAGGACTAGAAGCAAATTAAATGGTTTAGTGGTTTGAAATGT
TTTTGGTGGGGGTGTTTTATTTCTGATGTTTGGGTGATGGGCT