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Detailed information on CNT30281447


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ATM6|PIP24_MAIZE, E-value = 3e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404919Chenopodium quinoaBeta vulgaris28.0921.4180.6134forward
CNT30479174Chenopodium quinoaArabidopsis halleri35.4331.7179.29169forward
CNT30704968Chenopodium quinoaPrunus avium20.5510.8682.6598forward

Expression of CNT30281447

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MYKIALGRDTFLAMNSPSDTKDSNTTTVFTTSGGISLAFVPNHGKDGNIQEEKSSNKLSYASPVKRPLSELLHIYEWSRGRVMVVLS*

Sequence

>CNT30281447
CGGCAGACATGACGTTAACACCACCGCCGTATCGAACATAGTAAGACTTTTGGAAGGCTTTAACTAGCCCAACACCACAGATAGCACCAAGACATTGAGA
AATCATGTACAAAATTGCCCTTGGTAGAGACACCTTCCTGGCAATGAATAGCCCAAGCGATACCAAGGATTCCAACACCACCACAGTCTTCACCACCAGC
GGCGGGATCAGTCTGGCTTTTGTACCCAATCACGGTAAGGACGGTAATATACAAGAAGAGAAGAGTAGCAACAAACTCAGCTATGCAAGCCCTGTAAAAA
GACCACTTAGTGAGCTCCTCCATATCTATGAGTGGAGTAGGGGGAGGGTCATGGTAGTCCTTAGCTGAGAACTCAGGCTGGTTCGGCTCGGCCACGGTTT
CGACATCCTTAGTCATGGCGAGGAAGAGTGGTGATTAGCTAGAGAGAAAGAAAGGAGGTTGAGAGTGTATGTTGTTT