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Detailed information on CNT30281433


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377107Chenopodium quinoaArabidopsis thaliana17.8739.1181.62185forward
CNT30380803Chenopodium quinoaManihot esculenta17.137.7484.18177forward
CNT30709296Chenopodium quinoaGlycine max14.6937.6280.92152forward
CNT30305192Chenopodium quinoaTriticum aestivum18.3635.0682.63190forward
CNT30625119Chenopodium quinoaDaucus carota10.9226.8481.42113forward
CNT30688530Chenopodium quinoaTriticum urartu18.6545.5282.9193forward
CNT30576776Chenopodium quinoaOryza barthii14.5942.6680.13151forward

Expression of CNT30281433

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MWVLGLGLRACTISGNFIPSRMKNTGKLFPTRSKLPCDKQNFRI*

>peptide 2 (35 aa)
MGTIDGSSKIMSKITEQIMIKGWFKYSSKSKKPIK*

>peptide 3 (33 aa)
MIVIPDPEPKIRDTNVSQSSAFPKACSKVAGSL*

>peptide 4 (32 aa)
MLLGKNETKASASNQTKKIYDLVMIRAEQSKR*

>peptide 5 (44 aa)
MVREEIHDPPVLLNVGFRIGLEGMHHIREFHTITNEKHREIVPH*

Sequence

>CNT30281433
AGGAACACCAATATCATCAAAGAGGAAAGTGAACATGTGTAAACTCTCGGGATGGTGAGAGAAGAAATCCATGATCCTCCAGTTCTCTTGAATGTGGGTT
TTAGGATTGGGCTTGAGGGCATGCACCATATCAGGGAATTTCATACCATCACGAATGAAAAACACAGGGAAATTGTTCCCCACTAGATCGAAGTTACCCT
GTGATAAACAGAATTTTAGAATATAATATATGCTGTTGGGAAAAAACGAGACTAAAGCTTCAGCATCAAATCAAACTAAAAAGATTTATGATCTAGTCAT
GATAAGAGCTGAACAATCAAAACGCTAAATCAGTGAGCTACATACAGCAAAGAGGTTATATTCAGCATTATGGACAAGGCCATCTTTCCAGAATACTGAA
CCTGACAACTATCTCTGAGAAGTATCCACCACCAACACGGCCAAGAAAGTTGCAGACGCTGATGATTGAGACAAAGATTCTTGGACTGGAATACCCAAGA
GACTCAGATATCTGACCCATATTATCAATGATTGTAATACCAGATCCAGAACCCAAGATTAGGGATACAAACGTAAGCCAAAGCTCCGCCTTTCCTAAAG
CTTGTAGCAAGGTAGCAGGCTCTCTTTGACTGGATAATTCACTTGTGGAGAGAATGACAGCAGAATGGGCACTATTGATGGAAGTAGCAAGATAATGAGC
AAGATTACAGAGCAAATTATGATCAAAGGTTGGTTCAAGTACTCTTCAAAGAGCAAAAAACCCATCAAATAAGCAGCCAAGATGAGGCAAACACCATAGA
CAAACGAAAAGCTCAAACTGTCAGAAGGCCTTTTCTGTCGATGACCCTCCACGTACCTTATAGCAAACATAAGAGAAAGAACAACAATTGAGGGAACAAT
AGCTATCGTTAATATGAGGAAATCACGATTAGTAGTGCTGAAGAAGTGATAAATTTGGCTTAAAATTGCTCCACTCAATCCATTAAATCCTTTTAGTATC
CCCACGACAGGGCCTCGGCTATCAGGGAAGTTTAG