Detailed information on CNT3028112


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJ22|CESA9_ARATH, E-value = 3e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629098Theobroma cacaoVigna unguiculata46.4544.3986.47170forward
CNT30313869Theobroma cacaoCamelina sativa21.869.778580forward
CNT30112309Theobroma cacaoFicus carica30.0535.3781.82110forward

Expression of CNT3028112

Peptides detected in this lncRNA

>peptide 1 (34 aa)
KTSPCNVTPAEQFSTEEHKFLLQQLHNHPSQTGN*

Sequence

>CNT3028112
CAAAAACTTCACCATGCAACGTAACACCTGCTGAACAATTCAGCACAGAAGAACACAAATTCCTTCTGCAACAACTTCACAACCACCCTTCGCAAACTGG
TAACTGAAGAGCCAAAGCTGCTTCTTTATTCGTCTCTTCCTAGTCATCACAATTCAACCCACAAACTTCTAACACAGGACCATCTTTAGAGACAAATGGG
TTAATTCGCACCCACATAAGAGTCAAGATTGAGGCCAGCAGGATAGACCACACCAAAATAATGGTTGGCATCCGATCTTGTTTCCCGAGCAAACCCTTAA
GGAAGGGGTAGAGCTCAGAAAATTCACCATCATCTGCTCCTTTAGAAGTCACAGTGAAGCTTGTGC