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Detailed information on CNT30279704


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30438827Chenopodium quinoaAegilops tauschii11.1623.889580reverse complement

Expression of CNT30279704

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MEILRPVISLLSSMIVCLFRQVPLQLGQTRKALHLSYKRY*

>peptide 2 (45 aa)
KGSMKIRRLTKSLLPSLLQGIPLSGQRSFIFWLYITFLNYLPSIL*

Sequence

>CNT30279704
AAAGGTTCAATGAAGATTCGCCGCCTAACTAAATCCCTTCTTCCTAGCCTTTTGCAAGGTATCCCTTTGAGTGGGCAAAGAAGTTTCATCTTCTGGCTTT
ACATAACCTTTCTCAACTATCTCCCAAGCATCTTGTGATCCTAGCAAGGCTCTAATTGCCCAATTCTCACAATTCTCTTTTGTAAGTCTAGGAAATTGAA
ATGGAACCAAACCATTTGCCATTCCTTATTCAACAGGAACTTTGACTCCAGATGGATGTCGAGTACGCTTTCGCGATAGGTATTGGTGGAGCTTGCGTAA
TGTAGTAGTAGTTAAGGCGACATTGAAGTCTTTCTTTTCTTTTTTGGAGGGGGCGGAATATTGAACTAAGGTAAGGCGGGCATGAATTAACATTTTTTTG
TACTCTATGGAAATCCTACGCCCAGTGATTTCTCTTTTATCTTCAATGATAGTCTGTCTTTTTCGTCAAGTACCTCTTCAACTAGGTCAGACGCGCAAAG
CGCTCCACCTGAGTTATAAGAGGTATTAAATAATGAATAATATAATATAATATAATGTATGTTCTAAATTAGAGGATTTGATAGTGATTTCTGGAAGGAA
ATTACCCCTAGAATTGACCGTGAATGACCTTGTAATCGCCTATATTCCCACCAATGTGATCTCCATTACTGATGGATAAATCTGTTTGAAAACAGAGCTC
TTTTATCGCGGAATTAG