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Detailed information on CNT30279437


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 6e-72

BLAST vs NONCODE:
NONCQUT008829, E-value = 3e-36

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674998Chenopodium quinoaSetaria viridis22.5845.5381.5173forward
CNT30519871Chenopodium quinoaSetaria italica42.6949.480.73327forward
CNT30315797Chenopodium quinoaCorylus avellana43.2150.0880.97331forward
CNT30380641Chenopodium quinoaManihot esculenta39.8244.1485.25305forward
CNT30200358Chenopodium quinoaPisum sativum42.6952.5782.57327forward
CNT30712448Chenopodium quinoaGlycine max16.9730.5986.15130forward
CNT30177168Chenopodium quinoaSecale cereale42.6944.0181.65327forward
CNT30284356Chenopodium quinoaTriticum aestivum46.2154.8881.36354forward
CNT30220094Chenopodium quinoaHordeum vulgare44.5259.4180.35341forward
CNT30591253Chenopodium quinoaMusa acuminata13.9734.2984.11107forward
CNT30443283Chenopodium quinoaAegilops tauschii21.4126.7184.15164forward
CNT30240007Chenopodium quinoaAvena sativa46.2163.182.49354forward
CNT30655661Chenopodium quinoaTriticum dicoccoides46.2165.4381.36354forward
CNT30474628Chenopodium quinoaSaccharum spontaneum37.4724.1479.44287forward
CNT30719823Chenopodium quinoaTriticum spelta46.2149.381.36354forward
CNT30622400Chenopodium quinoaCajanus cajan36.1630.2781.95277forward
CNT30328607Chenopodium quinoaAsparagus officinalis18.5424.8380.28142forward
CNT30585391Chenopodium quinoaEchinochloa crusgalli42.6950.2381.35327forward

Expression of CNT30279437

Peptides detected in this lncRNA

>peptide 1 (29 aa)
KQNNHIYSYRKLRQSINLLTNHHITPITT*

Sequence

>CNT30279437
GAAACAGAACAACCATATATATTCATATAGAAAATTAAGACAGTCAATAAATTTATTGACTAACCATCACATTACACCGATAACTACATAATATAGATAA
TAAACTACTTTCAATTAAAGATCTTCAACATATTACAAAATAAAACCCTAACCCTAACCCTAACCCAGAAATCAAGCCCTCTCACCACGAATCCTTCGGG
CAAGCTGGATATCCTTGGGCATAATAGTAACCCTCTTAGCGTGAATTGCGCAGAGGTTAGTATCCTCAAAGAGACCAACCAAGTACGCCTCGGCAGCCTC
CTGAAGAGCGGCAACAGCAGAGCTCTGGAAACGGAGATCAGTCTTGAAATCCTGAGCAATTTCTCTGACAAGTCTCTGGAATGGAAGCTTCCTGATGAGA
AGCTCAGTGCTCTTCTGGTACTTCCTGATCTCACGAAGCGCAACGGTTCCGGGTCTGAAACGGTGAGGCTTCTTCACTCCGCCGGTGGCTGGGGCTGACT
TCCGGGCTGCCTTGGTGGCGAGTTGCTTCTTCACTCCGCCGGTGGCTGGGGCTGACTTCCGGGCTGCCTTGGTGGCGAGTTGCTTCCTTGGGGCCTTTCC
TCCGGTGGATTTTCTGGCAGTTTGCTTGGTTCGCGCCATTGTTGATGATGAGAGAGAAAATAAAGGTTTTAGATAGAGAAAATTTGGAGTTGCAGAGAAT
GAATTGAGATTGTGAATGATTTAGGAGGGAGAAAGAGAGCGGTTATTTATAAGGAGGAGTTTTTGA