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Detailed information on CNT30279406


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9MAI5|ERF79_ARATH, E-value = 5e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30585986Chenopodium quinoaMusa acuminata13.8222.5381.7153forward
CNT30153825Chenopodium quinoaPrunus persica12.2924.8680.88136forward
CNT3051215Chenopodium quinoaCucumis sativus11.2920.5680.8125forward

Expression of CNT30279406

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MSLTLFANIPYITYGPLLSAAEEREIPSCGGALTHAPPDSTVVRLLLSPLALRHC*

Sequence

>CNT30279406
TTCTCAATATATTGTACTGAAGTATATTTAACAACCAAAACTTATCATTTAATTTATTCAAGTAACGTGCCAATTGATTAATTAACAATGTTTATTTATA
TAATTCTTCCACCAACAAGATCCTTATATGCTTGTTAGAGAATATTTATAATAATACTAAATGCTACTCGGTAATAATAATAACAAAAATAGATTAATAA
TTTACTAATTAAATAAAAAGGATGTTTGTTACTTCTGTATTTACAAAAACTCTGACAATATAAGAGCTGCGCCTTTATCTTCAAATTACAAAATTAAGGC
TCGCAATTCAACTCTCTCTTTATCATAATCTTAAGATAAACCACCAAATTAAAATTAAATTTTTTTTTAAAAAAAACACTAATTTAAAGTGGTGGGGCCC
ATTTCAAAGAACTACAATGAGATGATCTCATCCTTCATACAACTTCTTGAGGTGGGGCCAAATTAAGATCAAGATCAAGAACCATCCTCTGCCGTCCATC
ACTAGAATCAACGGCTGATATTTCACCTCGATTCTGAGTTCCATCATTACAACCCAACACGCGCCCACACCTGAACGCCTCTCGTATGTCACTCACTCTC
TTCGCCAACATTCCGTACATCACGTACGGTCCACTACTGTCGGCGGCGGAGGAGAGAGAAATTCCCAGTTGCGGCGGCGCGTTGACACACGCGCCGCCGG
ATTCAACGGTGGTGAGACTGTTATTATCGCCACTGGCGCTGAGACACTGCTGATCTAAGTAGGTGAAATTGGTCCGAGCCTTAGCACCGCGGAACTCTCG
GGCGGCGTTGTCGTAAGCACGCGCCGCCTCTTCCGCGGTGTTGAAGGTTCCTAACCACACGCGCGTCTTCTTCAAGGGGTCACGGATCTCGGCCGCATAT
CGGCCCCACGGCCGCTTCCGAACCCCTCGGTATTTAATCTCAGTTTGAGGTGTTACGGCTACTGCGGAATAGGCGGCGGAGGAGGGAGTAGGATTGTTAA
GAGCATTGTTATTGTCAGTGATTTGTTTAGGAGCCATATTTTTATTTCTAGAGAGAGAAAGAAGGTAGTTTTTAGAGAGAGAAAGAGGGTATTTTGTTGT
GGGATAA