Detailed information on CNT30279393


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FN37|PSKR2_ARATH, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30559962Chenopodium quinoaActinidia chinensis7.2925.2180.79151forward

Expression of CNT30279393

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MGFKFFVKKNVARFYVSVDYIWFTNLMEVC*

>peptide 2 (64 aa)
MLNVLSFLQLESEVGMVSFRKLLARSSTVRLDNPVKSSPIGPDKELFLRSSINTYLTREIVERY*

>peptide 3 (47 aa)
MSGYIQEVYSREFQLNLLLHGYHKDEEILTIQNLPNGLQIFRQEECC*

>peptide 4 (38 aa)
MPLIEEGSDEKLRGLIRLLSCIKVFGISPESELLEKSK*

>peptide 5 (36 aa)
MDLSPALLSSLISSETPMKLDPCNFSLCRLQQVSCQ*

>peptide 6 (34 aa)
HRQAIHRTSNSCFSRSLSQMNGSITCSSFFSNFI*

Sequence

>CNT30279393
ACACCGGCAGGCAATACACAGAACCTCCAATAGTTGCTTCTCCCGATCTTTGTCCCAAATGAATGGATCTATCACCTGCTCTTCTTTCTTCTCTAATTTC
ATCTGAAACACCCATGAAACTAGATCCCTGCAATTTTTCCCTTTGCAGACTTCAACAGGTCTCCTGCCAGTAAGAAGCTCCAAAAGGACAACGCCAAAAC
TGTAAACATCACCTTTGAAGGTAGCAGTTAATGTCTGGCTATATTCAGGAGGTATATAGCCGAGAGTTCCAACTAAATCTGTTGTTACATGGGTATCATA
AGGACGAAGAAATCTTGACAATCCAAAATCTGCCAAATGGGCTTCAAATTTTTCGTCAAGAAGAATGTTGCTAGATTTTATGTCTCGGTGGACTATATTT
GGTTCACAAACCTTATGGAGGTATGCTAAACCATGACCAGAACCTTGAGCAATTCTCAATCTTGCAGTCCAATTAAGGGCTGAGCCACCATCAATACACT
CGTGCAACCAATAGTCCAAGCTTCCATTCTCCATGAAAGAGTAGATCAACAATTTGTCATCACCAACCTGACAGTAGCCTTGCAAGGAAACAAGATTCTT
GTGCTGAGCCTTTGATAAAGCTTCCACTTCCGCACGAAATTCACGCTCCATTTGACCACAATCCCCAGAAAGCCTCTTGATAGCAACTTTACTGCCATCC
GGGAGGCTAGCTTTGTATACTAGACCAAATCCCCCACAACCAATAATATTTGCCTGACTGAAATTATCAGTGGATTTCAGCAAATCCCCAACTGTTAGAT
CCTTGCATTCTGAGTTCTGGAAAAGCACTAATTTTGCAGTAGTAAACCCTTCAGACAGTCTTGGAGGCCGGCCATTCTCTTCATCTAGAAAATCAACCGA
AGAAGCTCGAGCATCTCTCCTGGACAATTTCAGCAGAACGACTGCCAAGAGCAAGGCAATACCAACACCAACACTTATTGTTATCCCAATAATGCTTCTT
CTACCTAATTTATTGCTAGAACCAGAAGGGATACTCATATTGTGGTCATCGTTACAAGGAGGAGCTTGAGTTGACCCACAAAGGCCAAGATTGCCCTCAA
AGCTTGAGTTTGGAAAGCCCTGAAATTGTACTCCTGATGGTATTTGTCCCTGTAAATGATTATGTGCAACACTAAACTTCGAAAGAAATGAGAGTTTATC
AAGTGATCGAGGTATTGATCCGTATAGGACATTGAAGGACAAATCTAAGACCTCAAGATTCGGCATGTTTGATATAGAATCAGGAATGGTCCCTGTGATG
TTGTTTTTGCTGAAATCAAGCACGTGAAGTTGCTTCAACTGCCCTATCTCGACTGGTATAGTCCCATTAAATTTGTTGTTGCTCAAATATAGAGAAGGTG
GAAAGCTGGAGAGTTGGTTATACTGCAAGCCGTAAGAGCTGTTTCTCCTCACATACAGTGGGATGCCATTGATTGAAGAAGGATCTGATGAAAAACTACG
CGGATTGATCAGGCTACTGAGCTGCATTAAAGTTTTTGGAATCTCCCCAGAAAGCGAATTATTAGAGAAATCCAAGTAAAACACATTTTCCATCTGCCCA
ATCCAAGAAGGAATGCTCCCATTTAAGTGATTCCACGACAAATCAAGGACTTCTAGCTTATCACAATTCTGCAACCAAACAGGAATCTCACCATGTAGAC
CACAAGGATAAGTGTGATAAGATTTTTGCATTGCTGCAAGGTTGACAACGCTCCTGTCAAGTTCACCAAACTATTGTTTGACATTGACAGAAAGGAAAGA
GATCCAAGGTTTCCAAAGCTTTCCGGTACCTCACCATGTAACTCATTCTTGGCCATGCTTAACGTTCTCAGTTTCTTGCAACTAGAAAGTGAAGTTGGGA
TGGTGTCATTCAGAAAATTACTGGCAAGATCAAGTACAGTAAGACTCGACAATCCAGTAAAATCAAGTCCGATAGGGCCAGACAAAGAATTGTTTCTAAG
ATCAAGCATCAACACTTATCTCACCAGAGAAATTGTTGAAAGGTATTGACAACTGCTTCAACAAAGACAT