Detailed information on CNT3027914


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675703Theobroma cacaoSetaria viridis82.2787.5481.71246forward
CNT30535924Theobroma cacaoEucalyptus grandis91.9793.8684.73275forward
CNT30616384Theobroma cacaoSesamum indicum65.8929.2382.74197forward
CNT30403662Theobroma cacaoBeta vulgaris81.9451.0482.86245forward
CNT30710529Theobroma cacaoGlycine max90.9748.2381.99272forward
CNT30141877Theobroma cacaoLolium perenne31.7721.2190.5395forward
CNT30205386Theobroma cacaoHelianthus annuus89.9737.6282.53269forward
CNT30341751Theobroma cacaoEragrostis tef50.531.286.09151forward
CNT3051605Theobroma cacaoAmborella trichopoda81.9436.9581.63245forward
CNT3023318Theobroma cacaoPopulus trichocarpa44.8220.9487.31134forward
CNT3035160Theobroma cacaoCucumis melo90.353.5781.85270forward

Expression of CNT3027914

Peptides detected in this lncRNA

>peptide 1 (37 aa)
NLVKLDYKDLTETTLDCLVSTQEMDCTWLTVDCNLER*

Sequence

>CNT3027914
GTAATTTGGTGAAGTTGGACTATAAGGACTTGACGGAGACAACCTTGGACTGCTTGGTGAGTACGCAAGAGATGGACTGTACTTGGCTGACTGTGGATTG
TAACTTGGAGAGGTAGGACTATAGCTTGGTGATGTGGGACTATAACTTGGTGAGGTTGGACTGTACCCTGGAGAAGTGGGGCTATAAGCTGGTGAAGTAG
GGCTGTATGATGGAGATGTTGGGCTGTAAGAAGGAGATGTAGGGCTGTATGATGGGGATGTTGGGCTGTATGATGGAGACGTGGGGCTATATGCGGGTG