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Detailed information on CNT30279013


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641270Chenopodium quinoaNymphaea colorata86.4355.8383.321115forward
CNT30615967Chenopodium quinoaSesamum indicum86.933.3381.81121forward
CNT30652253Chenopodium quinoaRosa chinensis69.8469.4183.91901forward

Expression of CNT30279013

Peptides detected in this lncRNA

>peptide 1 (30 aa)
ELLPCKDQSLLIWGNALLILNLSLDIVDGV*

>peptide 2 (40 aa)
MVSEFSTSRVIVFPVRVLTKICIPPLRRRTRWRVDSFWIL*

>peptide 3 (37 aa)
MVSELSTSKVIVFPVKVLTKICIPPLKRSTRWRVDSF*

>peptide 4 (40 aa)
MVSELSTSRVIVFPVRVFTKICMPPLRRRTRWRVDSFWML*

Sequence

>CNT30279013
TCGAGCTGCTTCCCTGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTGTCGATGGTGTCTGAGCTCT
CAACCTCCAAAGTGATAGTTTTCCCAGTCAAAGTCTTGACGAAAATTTGCATTCCACCTCTTAAACGGAGCACAAGATGGAGGGTTGACTCCTTCTGAAT
GTTGTAATCAGCAAGGGTACGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATTTTGGTT
TTGACATTGTCAATGGTGTCAGAGCTTTCAACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTCACAAAAATCTGCATGCCACCTCTAAGACGGAGAA
CCAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCCTCAAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG
AATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTGTCAATCGTATCAGAGCTTTCAACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAG
ATCTGCATGCCACCTCTTAGACGAAGAACAAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCCTCAAGCTGTTTTCCGG
CAAAGATTAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTGTCAATCGTATCAGAGCTTTCAACCTCAAGGGTGAT
AGTCTTCCCAGTGAGGGTCTTAACAAAGATCTGCATGCCACCTCTTAGACGAAGAACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGA
GTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTTGGTTTTGACATTGTCAATGG
TGTCAGAATTCTCGACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAAATCTGCATCCCTCCTCTAAGACGGAGAACAAGGTGGAGGGTCGA
CTCCTTCTGGATATTGTAGTCAGCGAGCGTTCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTATCT
TGAATCTTCGTCTTAACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGAGTTATGGTTTTTCCGGTAAGAGTCTTAACGAAGATTTGC