Detailed information on CNT3027690


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 5e-14

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508793Theobroma cacaoSolanum lycopersicum52.0333.1682.81128forward
CNT30497803Theobroma cacaoDigitaria exilis53.2518.2283.21131forward

Expression of CNT3027690

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MWDYNLVRLDCTLEKWGYKLERWDYTQEM*

Sequence

>CNT3027690
GTGAGTACGCAAGAGATGGACTGTACTTGGCTGACTGTGGATTGTAACTTGGAGAGGTAGGACTATAGCTTGGTGATGTGGGACTATAACTTGGTGAGGT
TGGACTGTACCCTGGAGAAGTGGGGCTATAAGCTGGAGAGGTGGGACTATACCCAGGAGATGTAGGACTATAACCAGGAGAGGTAGGACTGTAGCCAGGG
GAGGATGGACTGTATCCTGGAGATGATGGGCTGTAACCAGGGGACG