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Detailed information on CNT30275523


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403408Chenopodium quinoaBeta vulgaris32.8914.5388.39224forward
CNT3042609Chenopodium quinoaPrunus dulcis18.6529.5383.46127forward

Expression of CNT30275523

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MCYSEIAHQAGNFGVHHQEAQFVWKCYLEQTEEDTEHHKETQTDSA*

Sequence

>CNT30275523
GGTGGGGGAGGAGGTGCTCCATAATAAGGTGCATAGCCATAAGAAGGTAAGTAGGCAGGTGGTGCAGGCGGTGCCAAAGTAGCTGCTGAACCATATACAC
TAGATGTAGGGGGTTGACCAGATGTGCTACTCTGAGATTGCACACCAGGCGGGAAATTTTGGTGTGCATCACCAGGAGGCACAGTTTGTGTGGAAGTGCT
ACTTGGAACAGACGGAGGAGGATACTGAACACCATAAGGAGACACAGACTGATTCTGCATAGGAGGATAATAACTTGATCCAGGAGGGGGAGGGACAGGT
GGCCCCCAAGGGACAGGAGTACCGTAGCTCCCAGGAGCAGAGCTACTCAGAGGCCCACCAGATGTGAATTGCTGAGACGGAAAAGCGCCTGGAGCTTGAT
TTGCAGCTGGATATGGTGGCATTGCTGGAGCAGCAGGAGGCTGGGGAGCGGTGGGTTGAGGAGGTTTCCCAGCAACTCTAACTGCAATAGTCCGGCCATC
TAAACGATAGCCATTCATACCGTTAATGGCAGCATTGGCCTGTTCAACACTGGAATACTTCACAAAACCATACCCTTTACTCAACTGAGTAACACGGTCC
TTTATAACCTTAGCCATCACAATCTCACCAAAAGGAGTAAATAGGCGTATCAAGCCATCGTCATCAAGCGTAGGTGGCAAG