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Detailed information on CNT30275131


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372926Chenopodium quinoaArabidopsis thaliana7.2122.483.7286reverse complement
CNT30402626Chenopodium quinoaBeta vulgaris16.7620.5189.5200forward
CNT3043425Chenopodium quinoaPrunus dulcis10.4820.3386.4125forward
CNT30164954Chenopodium quinoaPistacia vera6.1223.8687.6773forward
CNT3081457Chenopodium quinoaBrassica juncea5.9532.8787.3271forward
CNT30601253Chenopodium quinoaFraxinus excelsior9.7250.4387.07116forward

Expression of CNT30275131

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MWLSGLSFCFFYSVISIFNRMIIDIDFCFSSYIDPYYNIPC*

>peptide 2 (72 aa)
MNWLQRKIYLYNVTFGLYMLDWWERYLFNTLIIVLMWFILYNGSQQVSEIWKSSLDYAHSQSTLKRQIWGGA*

>peptide 3 (56 aa)
MWSWLSSNYELVATQDLPLQCHFWTLYVRLVGALPFQYTNHCVNVVYFIQRITTSI*

Sequence

>CNT30275131
AGAAGGATGAAATTGTGGGCCAAGAGGCCCATTGGATAAATGATACAGTAATAATCCGGCCCATATTATAATTGGGTTTTGACTATTCCCTAAATTATTT
GGTAAGTTCAAGGAAATGTAGAATATAACTGACTGTTATCGGGTCAAATTTGGCAGACCCAATTACGCTTTACATCAAATTCAAGTATTCAACAACTATT
TTTTCTCTCTCTTCAAGTCTTCAACCGTTAAATTTAGAATGCTGAATTGGATGAATTTCTGAGATTTTGTTGCCGAATTAGCAAGTTTTAGCTCAAGATT
AGCAAATTTGATTGCTGTTTTTGCTCGAGATCAGCTGAATTGGCGAAACCTATTTCGAATTAGGGCAACGATTCGTACTCTCGGTAATCTATTTTTGTTT
TAGGATGTTTTAATATAAGAATTGCAAATTTTTAGGTCAATTTATATCAAGCAAGAGATTATTAGACAAGTTTCAATTTGTTTGAAATTATTGGTGTTTA
GGTTCTGTGAATTTAAATTTGACAAACAGAATGTTGCAAATTTTCTGAGATAACTTGTTGAATTCTGCATTTAGATTTGCTATGTGGTCGTGGTTGTCGA
GCAATTATGAATTGGTTGCAACGCAAGATCTACCTTTACAATGTCACTTTTGGACTCTATATGTTAGATTGGTGGGAGCGTTACCTTTTCAATACACTAA
TCATTGTGTTAATGTGGTTTATTTTATACAACGGATCACAACAAGTATCTGAAATATGGAAGAGTTCTCTTGACTATGCTCATTCTCAATCAACATTGAA
AAGGCAAATATGGGGAGGTGCGTAGAAAATTTTTAGATACCTCAACTTACAATGGGAAGATGTAAGAAGTAATGCCACAGTTGATGTCGGACAGAACTTC
TAATCTGCTGGAAATTACTGGTAGATCCTATTGAATGTGGCTTTCGGGATTGTCTTTTTGTTTCTTTTACTCTGTAATCTCTATATTCAATAGGATGATC
ATTGATATCGATTTTTGTTTCTCATCATATATTGACCCTTATTATAATATTCCATGTTAATATTGTATTTTGAGAATGAAATTTTTGGAAGAGGGTCATC
ATTGAACAATTACTAGGAACAACCTTTCATTTTCAATTCTTTTGAAATTACAAATTTATATTTTGATTATACATCTTGGCTTTTGAATGTTTC