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Detailed information on CNT30274756


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 5e-75

BLAST vs NONCODE:
NONCQUT008829, E-value = 7e-103

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3069241Chenopodium quinoaQuercus suber34.3284.0982.16370forward
CNT3090157Chenopodium quinoaSolanum tuberosum23.0138.4583.06248forward
CNT30398097Chenopodium quinoaTriticum turgidum27.5538.8279.46297forward
CNT30538358Chenopodium quinoaBrassica napus5.7521.6887.162reverse complement
CNT30508643Chenopodium quinoaSolanum lycopersicum38.0353.3280.49410forward
CNT30441386Chenopodium quinoaAegilops tauschii19.5743.9681.99211forward
CNT30254117Chenopodium quinoaAvena sativa22.6345.2782.79244forward
CNT30309861Chenopodium quinoaCamelina sativa17.1629.8482.16185forward
CNT30720909Chenopodium quinoaTriticum spelta22.7337.5282.86245forward
CNT3053477Chenopodium quinoaAmborella trichopoda37.7665.0280.84407forward
CNT30329187Chenopodium quinoaDioscorea rotundata7.4220.6283.7580forward
CNT3099660Chenopodium quinoaOryza rufipogon11.627.5981.6125forward

Expression of CNT30274756

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MNSAKVSILKQTNQISLSSLLKSGDSGALEAEISLEILSNFSYKPLKWELPDEKLSALLVLPDLSKCHGSRAETMGLFHSAGGWG*

>peptide 2 (70 aa)
MRSSVLFWYFLISRSATVPGRKRWGFFTPPVAGADLRAALVASCFLGAFPPVDLRAVCLVRAINGGFGGF*

>peptide 3 (59 aa)
MSNLTKVVLNYNNNNKISVIPLSIKQTFRLPFNYTNLHYKTLIPNFIPKLQTLIKINQT*

Sequence

>CNT30274756
TTTTTTTTTTTTTGCATATAACCATCTTTTAAAAAATTATTGCAAAAAGCCACTAATTTTAAAACTTTTATTATAATTTACCACTTTTTAACCAAACCCA
CCAACTATTCTCCATAAACTAATGGTAAATTGCAACAAAATTTTTAAAATTGGTGGACTTTTGTAACATTTTCTTCAAAAAGTGAATATATGAAGAGAAA
AAATAAATAAATAAATAATAATTTAAAAGGTAATTTTATTCAAAATTTCCTTAATTTAATAACACTAATCATAATAAGAAAATATGAGTAATTTAACAAA
AGTAGTATTAAACTATAATAATAATAATAAGATTTCCGTAATTCCATTGAGCATAAAACAAACATTCAGACTTCCATTTAATTACACAAATCTTCACTAT
AAAACCCTAATTCCCAACTTCATCCCCAAATTACAAACCCTAATTAAAATCAACCAAACTTAATCTCAAGCCCTTTCACCACGAATCCGACGAGCAAGCT
GAATATCCTTAGGCATAATAGTAACCCTCTTAGCATGAATAGCGCAAAGGTTAGTATCCTCAAACAAACCAACCAAATAAGCCTCAGCAGCCTCCTGAAG
AGCGGCGACAGCGGAGCTCTGGAAGCGGAGATCAGTCTTGAAATCCTGAGCAATTTCTCTTACAAGCCTCTGAAATGGGAGCTTCCTGATGAGAAGCTCA
GTGCTCTTCTGGTACTTCCTGATCTCTCGAAGTGCCACGGTTCCAGGGCGGAAACGATGGGGCTTTTTCACTCCGCCGGTGGCTGGGGCTGACTTGCGAG
CAGCCTTGGTGGCTAGCTGCTTCCTTGGGGCTTTTCCGCCAGTTGATTTACGAGCGGTTTGCTTGGTGCGAGCCATTAATGGAGGATTTGGAGGTTTTTG
AGGAGAGAGAAAATGGAGGGAAAGTTTAATTTTTTTTGATGATATTCAGCTTGCTCGTCGGATTCGTGGTGAAAGGGCTTGAGATTAAGTTTGGTTGATT
TTAATTAGGGTTTGTAATTTGGGGATGAAGATGGGAAATTAGGGTTTTGTAGTGAAGATTTGTGTAATTAAATGGAAG