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Detailed information on CNT30274489


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Chenopodium quinoaNymphaea colorata74.4351.584.19911forward
CNT30701594Chenopodium quinoaQuercus lobata72.5586.5582.55888forward
CNT30500348Chenopodium quinoaCoffea canephora70.6757.4884.39865forward
CNT3019912Chenopodium quinoaCitrullus lanatus75.1655.0684.24920forward
CNT30405422Chenopodium quinoaBeta vulgaris57.7673.8887.27707forward
CNT3044330Chenopodium quinoaPrunus dulcis74.8474.985.37916forward
CNT30165846Chenopodium quinoaPistacia vera72.0674.0685.15882forward
CNT30636316Chenopodium quinoaCapsicum annuum74.5944.0484.12913forward
CNT3094992Chenopodium quinoaSolanum tuberosum74.5978.4486.2913forward
CNT3087979Chenopodium quinoaVigna radiata54.0870.3585.5662forward
CNT30238962Chenopodium quinoaBrassica oleracea74.3547.0882.64910forward
CNT30171101Chenopodium quinoaTrifolium pratense74.5954.984.67913forward
CNT30312526Chenopodium quinoaCamelina sativa74.9285.0683.42917forward
CNT30609156Chenopodium quinoaGossypium raimondii74.3570.4383.19910forward
CNT30229606Chenopodium quinoaAnanas comosus74.3568.6883.19910forward
CNT30217449Chenopodium quinoaKalanchoe fedtschenkoi74.3560.383.19910forward
CNT30623040Chenopodium quinoaDaucus carota72.4779.8484.78887forward
CNT30643414Chenopodium quinoaCannabis sativa71.9883.7582.97881forward
CNT3027950Chenopodium quinoaTheobroma cacao70.198.1782.63858forward
CNT3026527Chenopodium quinoaPopulus trichocarpa73.0491.583.89894forward
CNT30321313Chenopodium quinoaAsparagus officinalis70.0265.3785.18857forward
CNT30111644Chenopodium quinoaFicus carica73.6963.383.92902forward
CNT30726149Chenopodium quinoaLupinus angustifolius74.3547.7984.4910forward
CNT3050777Chenopodium quinoaCucumis sativus69.0487.0284.62845forward
CNT30114596Chenopodium quinoaEutrema salsugineum7588.8783.12918forward

Expression of CNT30274489

Peptides detected in this lncRNA

>peptide 1 (91 aa)
MSLETTTETEDKVKGRLLLNVVISKGTPILELLTSKDQPLLVWGDPLLVLDLSLHIINSVRALNLQSDGLASQGFHKNLHSSPQSEHQVKG*

>peptide 2 (88 aa)
MESGLLLDVVVSQSTAILELLTSENQPLLVWGDTFLVLNLGLNIVNGVGALNLQSYGLPSKSLDENLHTTTKTEHQVKSGLLLDVVIS*

>peptide 3 (31 aa)
MVSELSTSKVMVFPVRVLTKICIPPRRRSTK*

>peptide 4 (40 aa)
MVSELSTSRVMVFPVKVLTKICIPPLKRSTRWRVDSFWML*

Sequence

>CNT30274489
TTAAATCGCTTAGAAATCAATTATACATGGCACAAAGCATTTGCAGCAATAAAGAAACCAGAGCATAACAATTAAAAATAGCAACAAGAGAATGTAGACA
CAAACAGAAGATATTTTATTCACAGCAGAATAAGAACTTCATTGAGTTCATAAACACTAAGAAGAAACACAACCAGAGAACTTAATTCATAACAACTAAA
ATAGAAATTGTTCCAACAAGTACTTAATGCATTCACAATTCATAGAATAGAAACCAAATCGACGACACAAACTTCATGCCAACGACCAGAGAGACACCAC
CATGAGTTTAGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCGAGCTGCTT
ACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGGATCTTAGCCTTCACATTATCAATAGTGTCCGAGCTCTCAACCTCCAAA
GTGATGGTCTTGCCAGTCAAGGTTTTCACAAAAATCTGCATTCCTCCCCTCAATCGGAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCCG
CAAGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGAATCTTCGCCTTAACATTGTC
GATGGTGTCCGAGCTCTCAACCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTCCTCCCCTCAAACGGAGCACCAGATGGAGA
GTGGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGGGATACCTTCCT
TGTCCTGAATCTTGGTCTTAACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTTATGGTCTTCCCAGTAAGAGTCTTGACGAAAATCTGCATACC
ACCACGAAGACGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCCGTCCTCTAGCTGTTTTCCGGCGAAGATCAGC
CTTTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGGATCTTAGTCTTGACATTGTCAATGGTGTCGGAACTCTCGACCTCGAGAGTGATAGTCTTTCCAG
TAAGGGTCTTAACGAAGATTTGCA