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Detailed information on CNT30273807


BLAST search results

BLAST vs Swiss-Prot:
sp|P12333|CB2A_SPIOL, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404250Chenopodium quinoaBeta vulgaris39.1458.6784.72602forward

Expression of CNT30273807

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MNLDDFCKILNDDQYEEDTWRFWDCNNNLVEICLCLDFHKLQPTKSRSRVSSR*

>peptide 2 (42 aa)
FYVLVAFLAPKLCTPFIEVVELNKFVFDCPRILLKIKTYFVL*

>peptide 3 (29 aa)
MAHLQWITSSSRFLAKVSGSAERPAVSQP*

Sequence

>CNT30273807
CTTTTTATGTCTTAGTTGCTTTCCTTGCTCCTAAATTATGTACACCCTTCATTGAAGTCGTAGAACTCAATAAATTTGTGTTTGATTGTCCCCGTATCTT
GTTGAAAATAAAAACATACTTCGTATTATAAATTGTCACATAATAATTATTAAATATATTCATTCATTAATTAATCTGAATCAATAAACACAATTTACAT
TGAAGCACAAGAAGTTCAAAACTCATACAAACACTACCGTTTTTATCATCCCTAAACTCCTAACAAGTAACAACCACTTCATTTACCAGGAACAAAGTTT
GTAGCACAAGACCAAGCATTGTTATTAACCGGGTCGGCGAGATGGTCAGCTAGGCTCTCCAACGGACCCTTACCGGTAACAATAGCTTGTACAAAGAACC
CAAACATAGAAAACATAGCCAACCTACCGTTCTTAATCTCCTTAATCTTCAACTCGGCGAAGGCTTCCGGGTCATCCGCCAACCCCAACGGATCAAAGCT
ACCACCCGGGTAAAGCGGGTCAACCACTTCACCAAGTGGGCCACCCGCGACCCGGTACCCTTCAACAGCACCCATCAAGATTACCTGGCAGGCCCAAATA
GCAAGAATACTTTGGGCATGAATCAAACTTGGGTTACCCAAATAATCCAGCCCACCTTCACTAAATATTTGTGAACCAGCCTTGAACCAAACGGCCTCAC
CAAACTTAACCCCATTTCGGGCCAATAGCTCGGGAAAAACACAGCCCAATGCACCCAACATGGCCCATCTACAGTGGATTACTTCAAGCTCACGGTTCTT
AGCAAAGGTTTCAGGGTCAGCTGAAAGACCAGCAGTATCCCAACCATAATCACCAGGAAATTCACCAGTAAGGTAAGATGGTGCCTCGCCCGAGAACGGG
CCTAGGTACTTAACTCGGTCTGGACCGTACCATGGACTACTGCTTGATGATACTGTCTTGGGCTTTCCGGCTGTCTTTCTCATTGTGATCCTTCCCTCGC
CGAGGATTTCTGAGGCGGTTGGGCCGAGCTTTAATGCCTTCCCGGCGAGAGAAGGTGAAGATAGAGCCATAGTGGAGGAAGCCATAATAGAGAGAGTGTA
ATAATGTTTGTAGTAATGAGTTTGTGTTTGATCATGGAATATGGGAAGTTATGAAGTTTGGGTTGGTTTAATATAATAGGAAAATGTGGGGTATTATTGT
TATCTAAAGGGATATCTTTATCTAGTTTCTTATTTGTTTGGGAAGATTTTTTGGTGTTGTTTATAGTTGGTATTTGTCTAAACCATGAATTTGGACGATT
TTTGTAAAATTTTGAATGATGACCAATATGAGGAAGACACGTGGAGATTTTGGGATTGCAATAATAATCTAGTAGAAATCTGTTTGTGTTTGGATTTTCA
TAAGTTACAACCAACTAAATCAAGGAGCCGAGTTTCATCAAGGTGATTAAGCAAAGTTGTTGTCTTCTAGTCCTACACTCTCTTCATTCTAATTTATTAC
AAGTATGGCTCTTTTTTGGAACATAGTTTTAATTCAAT