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Detailed information on CNT30273296


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30229782Chenopodium quinoaAnanas comosus9.1929.7810067forward

Expression of CNT30273296

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MHFHVNSTVNRIVAKSSSLGLFAGAFLVNEQCNVQLPTRHMERNYL*

>peptide 2 (35 aa)
MQQGNLRLFLLKFLSFLSITMIIPLFKQIEIKGTC*

>peptide 3 (34 aa)
YKQVTYLISILSFFMQPSYQKLDSRFASSSCRRF*

Sequence

>CNT30273296
TATAAACAGGTCACATATCTGATTTCAATACTATCTTTCTTTATGCAACCTTCTTACCAAAAACTCGATTCAAGATTTGCTTCGTCAAGCTGCAGAAGAT
TTTGAGTTCAGAGGGCCTAACCATAATTCCATGCAGCAAGGAAACCTTCGACTCTTTTTACTTAAATTTCTCAGCTTTCTGTCTATCACAATGATAATTC
CACTATTCAAGCAGATCGAGATTAAGGGAACTTGCTAAACATCCCAACGCTTAGATCCGGCTCTACCCAACCTTTTCTGGTTCACTCCAACATTCCCCAC
TTGTCCAACTGTTGCTGAGCAGTTTTTGGATATCAAACGGACCTCCCAAGTGATTTTAATGTGGCCGATTTCCTCTGGGATGTAAAATATATCTCTTCTC
ACCATCCCCATAGTGTATGAGACAAATGTATGCATTTCCATGTCAATAGCACTGTCAATCGAATAGTTGCCAAGTCATCTTCATTAGGACTTTTTGCAGG
TGCTTTCCTTGTTAACGAGCAATGTAATGTGCAACTACCAACCAGACACATGGAAAGAAATTACCTCTGATTGAGTGAACTTGAGACTAAATACGACCAA
CACAAACGAGAACCATGATAGAAAAAAAAAGTTGTAACTTAGTAAGCATAGAATTGAAAAATGAGCTTATTGAAAAATGAGCATAAATAAGATCAAGCGA
TAATGGTATATAAGCGTTTCTTATTCATT