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Detailed information on CNT30273262


BLAST search results

BLAST vs Swiss-Prot:
sp|P12355|PSAF_SPIOL, E-value = 4e-113

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513785Chenopodium quinoaJuglans regia11.7231.1980.93194forward
CNT30618119Chenopodium quinoaSesamum indicum10.1532.7584.52168forward
CNT3019440Chenopodium quinoaCitrullus lanatus15.8969.3980.61263forward
CNT30525128Chenopodium quinoaPhaseolus vulgaris11.1842.9279.46185forward
CNT30709011Chenopodium quinoaGlycine max12.6323.0278.47209forward
CNT30173780Chenopodium quinoaTrifolium pratense6.2821.8583.65104forward
CNT30144424Chenopodium quinoaMedicago truncatula20.4269.1281.95338forward
CNT30313614Chenopodium quinoaCamelina sativa6.6528.3581.82110forward
CNT30716553Chenopodium quinoaMalus domestica golden11.5429.0784.82191forward
CNT30623157Chenopodium quinoaDaucus carota13.0521.8284.26216forward
CNT3032243Chenopodium quinoaTheobroma cacao13.1736.6478.9218forward
CNT3038681Chenopodium quinoaCucumis melo13.656.1180.44225forward

Expression of CNT30273262

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MTKGGELYAFYWFVHILGVAFLDLFSYCFYV*

>peptide 2 (32 aa)
MEEDWNLEELKKKKGEVGFRFCEDKIGNDKGR*

>peptide 3 (29 aa)
SWTAFLRNGKQRKFKEILINMAPIASLVS*

>peptide 4 (30 aa)
MLHSMFEFTLNISFSIYITLALSIHTSILY*

>peptide 5 (63 aa)
VVDRLLKEWQTEEIQGNTDKYGSYSFSGFLGEYNVHVVFGNKTTNSTFSLSQSDETKHINIQL*

>peptide 6 (59 aa)
MGLVLQCRPLRHRVLLSMRTAALRIEPTPRLRWLQPWLGQVCLVDDHFLVVVGMLSLMV*

>peptide 7 (48 aa)
MFMLYLETKPQIPHSHSAKVMKPSILTFNCDFSTSLLSLVLAFKHTTN*

>peptide 8 (38 aa)
MSAIAASGATVHEDSSTEDRANAAAALAPTLVRSSLFG*

>peptide 9 (39 aa)
MRQFHTDKRSSIEHKTVTLAQKSYVNSNTLIRINKLAIE*

Sequence

>CNT30273262
GTCGTGGACCGCCTTCTTAAGGAATGGCAAACAGAGGAAATTCAAGGAAATACTGATAAATATGGCTCCTATAGCTTCTCTGGTTTCTTAGGAGAATACA
ATGTTCATGTTGTATTTGGAAACAAAACCACAAATTCCACATTCTCACTCAGCCAAAGTGATGAAACCAAGCATATTAACATTCAATTGTGACTTCTCAA
CTAGTTTACTAAGCTTAGTTTTAGCTTTTAAACATACAACAAACTAAAGTTGCATTAAGGTATGCTTCACAGTATGTTTGAGTTTACATTAAACATATCA
TTTTCAATTTACATTACTCTTGCTTTATCCATCCATACATCGATTTTGTACTAGTACAAGTTATGCATCTAGTAAACGGCAAATTCTAGTATGAGACAAT
TTCATACCGACAAGAGGTCTAGTATTGAACATAAAACTGTAACACTAGCACAAAAAAGTTATGTCAATTCTAATACTTTAATCCGGATTAATAAGCTAGC
AATTGAGTGAATCAAGAAACAAATTACGAAACCAACACACATATATAACGTTCTGAAATTAGAGTATCTTACGATATAATAATATAGTACATACACAAAA
TTAAAACAGACAACAATATGATATCTCAATTGAACAACAAGAATAATACTAAAAATTAGACATTGTTGTCAATAAGGTCACCATTGAGCAACTCTCTGTA
AGCAGCAACAGGCCAACTGAAACCCCTAAAAAGAAGTCTTGAAGCCAAAGGAACATCAATAATGATCTCCTTCTGAGTAGGCTTCTTCTCATCACGAATT
GCAATCAAATAACTCCGTCCGACCCACCCGATCCACCCGGCAATATACAAGAACAATATACCGGGAGTAATAAACTCACCCCAATGTCTCTGATCACCGC
TTACTATCAAATGAGGAAGTCCATCTGACCCACATAATAGCCCGTACTTTCCATAGTTATCAAACCTTCTCTTGGTCTTTTCCATCGTAGCTTGGATCGC
CAAAGCTGGTGCACTATCAGGCGCGTAAAGCTTTAAGGATGATTGTAGCTTTTTTAAGGCCTGTTTTTCACGTTTAGCGAATTGTTTTGATTCTTTGCAT
GGGGTTAGTCCTGCAATGTCGGCCATTGCGGCATCGGGTGCTACTGTCCATGAGGACAGCAGCACTGAGGATAGAGCCAACGCCGCGGCTGCGTTGGCTC
CAACCTTGGTTAGGTCAAGTTTGTTTGGTTGATGATCATTTTCTTGTTGTTGTTGGCATGCTATCTTTGATGGTCTAGGTGTGAATGACGTGGAGAAGTT
TCTAGGTTTAGCGGTTGCGAGTGGTTTGTAGAGGTTAGTGGGAATTGTCAAAGACATGGTGGGAGAATGAGGAGAGAGAAAATGGGGGTGGGAGGAGTTG
TGTGATATGGAGGAAGATTGGAACTTGGAAGAATTGAAGAAGAAGAAAGGAGAGGTGGGATTTAGATTTTGTGAGGATAAGATAGGAAATGACAAAGGGA
GGTGAGTTGTATGCTTTCTATTGGTTTGTTCATATTTTGGGTGTTGCTTTTTTAGATTTGTTTAGCTATTGTTTCTATGTTTGAGGGTGTGATTTGGGTA
GATTTGAATGTAGAGGTGGAGTATGTGGATAACACAAGCTTGTGACTTGGACAAG