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Detailed information on CNT30272593


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515731Chenopodium quinoaJuglans regia32.3690.983.44779forward
CNT30525184Chenopodium quinoaPhaseolus vulgaris55.3485.0681.011332forward
CNT3097291Chenopodium quinoaSolanum tuberosum57.1789.3583.721376forward
CNT30511508Chenopodium quinoaSolanum lycopersicum45.9584.5684.181106forward
CNT3028051Chenopodium quinoaTheobroma cacao47.3293.4481.831139forward
CNT30334105Chenopodium quinoaCynara cardunculus56.8358.0280.71368forward

Expression of CNT30272593

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MVLPVRVLTKICICRQIISKSIIAQKGLYWTDHIVKPNNYL*

>peptide 2 (40 aa)
MVSELSISRVIVFPVRVFTKICMPPLRRRTRWRVDSFWML*

>peptide 3 (38 aa)
MLCGKLRSSMNCKTIRPNKKQFEARKLTTNSYSKSENY*

>peptide 4 (37 aa)
MVSELSTSKVIVFPVKVLTNICIPLLKRSTRWRVDSF*

>peptide 5 (37 aa)
MLAINSAITDYIHQSQIIANTSNNPIYNPIYIINGQL*

Sequence

>CNT30272593
AATTAGTACTTGTATTGTTCCGAGGAACAACAATAACGAAAACGAAAAGAGTACTTTATTAACAAACTGAACTTAGGGCAACCTTGCCTAAAAAAAGAAC
ACGGAAATTAGATATTGTTCCAAGAAACCTCTGCTACGGATTACTAAACAAAGTAAAAACAATGGCCACAAAAGCTTAAAACCACAGCGATCTCAACCAG
ACATCATTAAAAGCCACCACGGTGACGAAGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCGTCCTCCAACTGCTTA
CCAGCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGTATATCTTAGTCTTGACATTATCGATAGTATCTGAGCTCTCAACCTCCAA
GGTGATGGTTTTCCCAGTCAAGGTCTTAACAAATATTTGCATTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCA
GCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTTTGCTGATCTGGGGGAATGCCCTCCTTATCTTGAATCTTTGCCTTGACATTGT
CAATGGTGTCTGAACTCTCGACCTCCAAAGTGATCGTCTTCCCAGTCAAAGTCTTGACGAATATTTGCATTCCACTTCTTAAACGGAGTACAAGATGGAG
GGTTGACTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCAGGGGGAATGCCTTCC
TTATCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAACTTTCAATCTCAAGGGTGATAGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCATGC
CACCTCTTAGACGGAGAACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCCTCAAGCTGTTTCCCGGCAAAGATCAA
CCTCTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTATCAATAGTGTCAGAGCTTTCAACCTCAAGGGTGATAGTCTTCCCA
GTGAGGGTCTTTACAAAGATCTGCATGCCACCTCTTAGACGGAGAACAAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCAT
CTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCTTTGTCTTGAATTTTTGTTTTGACATTATCAATAGTGTCAGAACT
CTCAACTTCAAGGGTGATAGTCTTCCCGGTGAGGGTCTTAACAAAAATCTGCATCCCCCCTCTAAGACGGAGAACAAGGTGGAGGGTCGATTCTTTCTGA
ATATTGTAGTCAGCGAGTGTTCTGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTATCTTGAATCTTCG
TCTTAACATTGTCGATTGTGTCAGAACTCTCAACCTCGAGAGTTATGGTTTTGCCGGTAAGAGTCTTAACAAAGATTTGCATCTGCAGACAAATCATAAG
CAAATCAATAATTGCACAGAAGGGATTATATTGGACTGATCATATTGTTAAACCAAACAATTACCTATAATCAACCCAATCAAAGCAACATATGTAAACC
AGCAATGCTTGCAATAAATTCAGCCATAACAGATTATATTCATCAATCTCAGATAATCGCTAACACAAGTAATAATCCAATATATAATCCAATATACATA
ATCAATGGTCAATTATAGAGCTTAGCATATATAAATAAATTTTAAATAAATAAATAAATAAATAACCCTAAAATACCTAACAGAAATTTAATTACCTAAT
TAAATAATAACAATCGACCATTATAACACGAACTCAATTCGAATAACAAAACCCTAAAAAGATGCTGTGTGGAAAATTAAGAAGTTCAATGAATTGTAAA
ACAATTAGACCTAACAAAAAGCAATTTGAAGCTAGAAAATTAACAACAAACAGCTATTCAAAGTCAGAAAATTACTAACAACAGCAATTCGAAGCCAGAA
AATTATCAACAAACAGCAATTGAAAGCCAGAAAAATATTAATCAGAGAAAAGCATCTCAAATCAGCGGCTATATATGCAGATCTATTCATGAAATAGAAT
CGGGTGTATTTCAAATCAATTAGATCCAAGATTAATCGACAAACAACTTTCAGATTTTAGGTCGACGAGACCAACAATTCAGGATTCAAAATTCAATCAA
ATAAATCAATTGCTTCAATTAAAATTAAAGAAAGAGATAAACAACGCATAATAATACGATAGCCAACGATAAAACACAAATTTTAAAAAAAAAACCGGTG
TTCATTA