« Back to Chenopodium quinoa search


Detailed information on CNT30272039


BLAST search results

BLAST vs Swiss-Prot:
sp|P08242|RR2_SPIOL, E-value = 2e-113

BLAST vs NONCODE:
NONATHT002193, E-value = 8e-111

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317837Chenopodium quinoaCorylus avellana23.1515.7887.95166forward
CNT30616942Chenopodium quinoaSesamum indicum72.849.3982.18522forward
CNT30709297Chenopodium quinoaGlycine max11.0222.784.8179reverse complement
CNT30541466Chenopodium quinoaBrassica napus40.5914.5789.35291forward
CNT3057337Chenopodium quinoaAmborella trichopoda71.6913.7982.68514forward

Expression of CNT30272039

Sequence

>CNT30272039
TTTGATTCAACGAACTCTTTCTTGACTTGGCTACTTTAATTTTCATTTTCTATTTTGGATACTGATTAATTCCATAATATATCCTGCTATTTTTAACAAG
TTTTTGAGATTCAAGATCTAGTAACCGATATAAAGTTTAGGAAGTCGGTTTTTAATTTTATTATGAATCAGGGGTTTCTTATATAGCTAGAACGGCCTTC
GCAAATTGCAAATACTAATTTGGTAAGAATTAATCGAATTGAAGCTATAGCGTCATCGTTTGCGGGAATCGAAATATCTGCAAGATCCGGATCACAATTT
GTATCGATTAAACAAATCGTTGGAATTCCCAAAGTAATACATTCTCGAAGAGCCGTATATTCTTCGTGTTGATCAACGATGATTACAATATTTGGTAATC
CTGTCATATATTTGATCCCACCTAGATATATTTGCAAGTGAGATAATTGTCTCTTCACCACCGCTGCATCTCTCTTTGCGAGACGAGCGAGTCTCCCTGC
CGTTTGTTCCATTCTCAAGTCCCTGAATTTATGAAGTCTCGTTTCTGTCGTGGACCAATTCGTTAACATACTGCCAAGCCACTTTTTATTAACATAATGA
CAGCGAGCCCTTATTGCAGCCCGTGCTACTGAGTCAGCTGCTTTATTTTTTGTCCCAACAATTAAAAATTGTTTTCCTCTACTTGATGCGTCAAAAACTA
AATCGCAAGCCTCTGAT