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Detailed information on CNT30271581


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403022Chenopodium quinoaBeta vulgaris3.7639.2285.7191forward
CNT30487971Chenopodium quinoaOlea europaea4.7922.3187.93116forward
CNT30717839Chenopodium quinoaMalus domestica golden5.4125.7985.5131forward
CNT30477709Chenopodium quinoaArabidopsis halleri3.4326.9591.5783forward

Expression of CNT30271581

Peptides detected in this lncRNA

>peptide 1 (43 aa)
RKPRLSRDWNILKTQVYDCLGTFSQCSASRSIQACFNFIQITS*

>peptide 2 (79 aa)
MSNFTYTSILHIGSNSGIKSVLLLLLLLLLLLLLSTTTCPLESISRITESPSWISLASIFSAMLSSKRLMIALLSGLAP*

>peptide 3 (86 aa)
MCCLYSSSVVAPMHCNSPLARAGFNMLAASIAPSAAPAPTKVCTSSIKRIRLSDSLTSSIIFCSLLSNSPRYLVPETRRLKSRVIT*

>peptide 4 (40 aa)
GNPDSPGTGTSSRPKFMIALVPSANVLHPVQFKHVSISFK*

>peptide 5 (32 aa)
MLGPSQCVACIHQALWPQCTVIHPLQELVLTC*

Sequence

>CNT30271581
AGGAAACCCAGACTCTCCAGGGACTGGAACATCCTCAAGACCCAAGTTTATGATTGCCTTGGTACCTTCAGCCAATGTTCTGCATCCCGTTCAATTCAAG
CATGTTTCAATTTCATTCAAATAACATCATAATTGTATAAACAAGAAAATTCCCATCTTTACACCTAAATCCAATGTCATACAAATTTAATTAAACAAAA
ATAAACTCAAGTAAATAAAAGGGTGTTAATTTTTCTCACCATAACGAGCTTCGGACCTCAATGTTGCAGAAATTTAGCCTTGCAAAGATCTGGGCACAAG
AGATTTTAATCACAAATTTGATTCTACAAACATCAAACTAAAGATATATCAGACAATGGGAAACATGAAATGTTAACATTTTTATATAACTAACAAGAAA
TTTAAGGAAGGATGAGAACATTTTACCCGAATTAAAACTTCGAATTATATTGGGGTTTTGAGTTCTTCCTTATTTCCCACTGATGAGAGCTGATTTCATC
GATTTCAGCGATTGTTAGGTGGTTCGAGTTTTTTTAGTGCTAGTTATACGACGTCGTTTAGGAGGACCACAAGTTCCACAACCAACCATATTATTTTCAT
TTTATAACTATGATTAGGTGATTCGTTTAATTAATACGCTTGAACATGAAAAAGTAAAACATAAGAAGGCTCGAACACGTATAAATCGAACACAAAAAGG
CTCGAACACGTTTATTTGTTCAAAACAAAACTATTACATTCAATTTTAATACTTCTTAATAAGGTCACCAAGTTCATTAGAAGTGTTAATTTTTTAAACT
AATACCAATGTCACATACATAAACTTTGCCTCAATATAACAACGACATGAATATATGAGTTCGTTGATGAGCTCAATTACTATAACATTCATTCGAAAAA
AGAGAAAAAGATGAAATACAATCAATATGCCTAAATCAAAGTAGAAAGATGTCAAATTTCACCTATACTTCTATACTTCACATAGGAAGTAACTCAGGAA
TCAAGTCAGTACTGCTGCTACTACTACTACTACTGCTGCTGTTGCTATTGAGCACGACGACATGTCCACTCGAATCAATATCCAGAATAACTGAATCACC
TTCTTGGATTTCACTCGCAAGCATCTTCTCAGCCATGCTATCCTCCAAGAGACTCATGATAGCTCTTCTCAGCGGTCTTGCTCCATAACTTGGATTATAT
CCATCGTTCACCACTCTATCTTTGAAGTAATTAGGAGAGTAATTCAGATAGTAGATGCATTTATAAGCCTCTTTGGTCATTCCTAAATTCCAAGCAATAT
TATACTGAGGTTTCTGTATCCATCTTTTTAGATCCATACAGTATGCAAAATTCTTGTATCTCAGGGTTAGGACACCATTAAAATGTGAATTCAAATCATA
ACTTTCTGGCGACCATTATAAAAGAGCACACAGATTTACTAATCTTAAGGGATCATGAAAGTGTGATACAGGTGCCAAAATCAGCATGGTTTCACTGATC
TTTATGAGTGAGCCTAAGTAAAAAGTGGATCATATTTCTCAAGACGAATCTTAAAGTATATAGGTTGCTTGATACCAACTAGCTACTATGGGTAAACAAA
GAAGATTCCAGAGTTGGGGCAGATTGCCAACCTATGAAAGAAAGAATTGTTTAATCTGAAGCAAAATGGAATGAAAGTGAATTATTATTACACAGCTATG
AGTAGTTTATGAGTAGTACTATTAGGATCACATCATAAGCAACCTACCCTTCCACCCCATAGATAAAAAGCATACGGAGCCCTCTGAGGATCTGTATTGC
TTCGTCTACAGTGGGCTCAGGCACTTCAACAGGCTGAAATCTTCTCTCTAATGCTGGGTCCTTCTCAATGTGTTGCCTGTATTCATCAAGCGTTGTGGCC
CCAATGCACTGTAATTCACCCCTTGCAAGAGCTGGTTTTAACATGTTAGCAGCATCTATTGCTCCTTCTGCTGCCCCAGCCCCAACCAAAGTATGCACTT
CATCGATAAAAAGAATTAGGTTATCTGATTCTTTGACTTCTTCCATTATCTTTTGCAGTCTACTCTCAAACTCTCCACGATATTTAGTTCCAGAAACAAG
ACGACTCAAATCAAGAGTAATAACCTGAAAGCAAAAAATGAGTTATAACCTGAAAGCAAAAGATGAGTCCTAAACATCTATAACTGGGATGATTACTTGT
AGATTCAATTCAAAGAGTGGACTCTGTAAGAAACAATTTTTATTTTCATAGTAGTATGTTGCAAAGCAATATCAGCCCATGCTATGATAGAATAGGATAA
ATTCATAAACAGGTTGTTGAGTTGAATAATACAAGAAGAAAAAAATTATTGCACACAGAATTGCTCCTTAATCCATGTGATTTTGCTGCAATATAAAGTG
GCTTGCTCACCAAAATTCTAT