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Detailed information on CNT30270599


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 9e-45

BLAST vs NONCODE:
NONCQUT001646, E-value = 3e-103

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524663Chenopodium quinoaSetaria italica22.2462.288.95362forward
CNT30549212Chenopodium quinoaIpomoea triloba54.7929.5795.52892forward
CNT30632746Chenopodium quinoaCapsicum annuum10.6323.9396.53173reverse complement
CNT30552690Chenopodium quinoaOryza glaberrima61.6765.5892.031004forward
CNT30442196Chenopodium quinoaAegilops tauschii50.4996.9392.09822reverse complement
CNT30205642Chenopodium quinoaHelianthus annuus58.2391.5995.57948forward
CNT30688674Chenopodium quinoaTriticum urartu46.3157.2592.31754forward
CNT30347837Chenopodium quinoaEragrostis tef33.9771.7390.42553reverse complement
CNT30363261Chenopodium quinoaSorghum bicolor21.1327.0288.08344forward
CNT30410483Chenopodium quinoaPapaver somniferum73.9658.8596.261204forward
CNT30642274Chenopodium quinoaCannabis sativa47.179491.28768reverse complement
CNT30104374Chenopodium quinoaOryza rufipogon57.3770.3391.54934reverse complement
CNT30576813Chenopodium quinoaOryza barthii12.126.7394.92197forward

Expression of CNT30270599

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MSALRHLGCSMFQGLGCSPIKAVRELGSERRETVWSISGVGVRALRGPFPSTRGPGRTHLWCTNYRAHGKRWVAKCGADNC*

>peptide 2 (56 aa)
MSVKMRTTCTWTERPYKVLLFPGIGFGPFLRSLGGRRRRPPSGGARAISEIPLWKS*

>peptide 3 (45 aa)
MGLTLAQCRKVKEVGDMMTGEPATEAPVNGGHNYNGPKVAKFLVG*

>peptide 4 (46 aa)
ESGPKIRPKGVVDGQQVNILVLPLVDPEGRRRLGYPKDGYRFKDAR*

Sequence

>CNT30270599
GTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCTTGTACTACCCCTTGTTGATCCCGAGGGACGGAGGAGGCT
AGGTTACCCGAAAGATGGTTATCGGTTCAAGGACGCAAGGTGACCCTGTTTTTCAGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCAATGTTCGAGTA
CCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCAAAACCGACACAGGTAG
GTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCGTCACAAAGGGG
GTCGAAGTGACAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCTCCACAAAGTCGTAAAACCATGTATGGGGCTGACGCTTGCCCAGTGCCGGAAGGT
CAAGGAAGTTGGTGACATGATGACAGGGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCATAATTATAACGGTCCTAAGGTAGCGAAATTCCTTGTC
GGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGC
ACCTGGACAGAAAGACCCTATAAAGTTTTACTGTTCCCTGGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCCCCTTCCG
GGGGGGCCCGAGCCATTAGTGAGATACCACTCTGGAAGAGCTAGAATTCTAACCTTGTGTCAGGACCTACGGGCCAAGGGACAGTCTCAGGTAGACAGTT
TCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTTGGGCCGGACGGAGATTGGCCCTCGAGTGCAAAGGCAAAAGGGAGCTT
GACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGGGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTA
GGGATAACAGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGACCTCGATGTCAGCTCTTCGCCACCTGGGTTGTAGTATGTTCCAAGGGT
TGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTTGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACC
TTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAATTATCGTGCCCACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGC
TGAAAGCATCTAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCCTATTCCTACTTCCCCAGAGCTCCTGATAGCACAGCTGAGGCAACGACGGGTTCTC
TGCCCCTGAGGGGAGAGCGACAGAAGTTTGGAAAGAGAAGGTCACGGCGAGACGAGTCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCAGTGATGT
ATGCAGCTGAGGCATCCTAACAGACCCA