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Detailed information on CNT30269412


BLAST search results

BLAST vs Swiss-Prot:
sp|P27758|NDHH_SECCE, E-value = 7e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201822Chenopodium quinoaPisum sativum20.210091.32380forward
CNT30569543Chenopodium quinoaActinidia chinensis21.118.389.92397forward
CNT30556103Chenopodium quinoaOryza glaberrima7.0743.6190.98133forward
CNT3077153Chenopodium quinoaBrassica juncea11.0628.2688.94208forward
CNT30262672Chenopodium quinoaBrassica rapa27.647.2788.08520forward
CNT30689544Chenopodium quinoaTriticum urartu27.78.3486.56521forward
CNT30425744Chenopodium quinoaPapaver somniferum6.1138.3391.3115forward
CNT30151243Chenopodium quinoaBrachypodium distachyon7.4421.8886.43140forward

Expression of CNT30269412

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MMLSIYFLGKIHFNNPTMGDLPTIIPTIR*

>peptide 2 (30 aa)
MEKRACRINIKFGEGKDSPTSACFVFYRES*

>peptide 3 (39 aa)
MKFFLVVGTVIGFSPIHSFTNSFLHELLKTTRYSSKFKI*

>peptide 4 (33 aa)
MVRAHIDYHEVFSGSWYSHRFFSDSFFHKFIFA*

>peptide 5 (32 aa)
MGSKSSYLIGKTDYLKFNRPSVFFFFFSSEITD

Sequence

>CNT30269412
TATGATGCTTTCTATTTATTTCTTAGGAAAAATACACTTTAATAACCCAACTATGGGCGATTTACCTACAATAATCCCAACTATTAGGTGAGTTTTCCTC
CATCAGTCCCAAACCGGTCAACAAAAGTCAATAACCTATTATTGTAGGTTGTTTGACACGTGTCAGCGTGTGAGTGGTTCCAAAATTAAAAAAAAAAGAG
AAATTCTGGCAGCCACCATGCCAGCCATAACCACCACCTCCCAGAAAAGAATTTGTCTACATCATCGGTAGAGTTTATAAGACCACGACTTATCCTGAAA
GGAAATGAATGGAAAAAAGAGCATGTCGTATCAATATAAAATTCGGAGAAGGAAAGGATTCTCCCACGAGTGCATGCTTTGTTTTTTATAGAGAATCCTA
ATTATTCGATTATCCAAAAAAATAAAGGATTTCTAACCATCTATTTTTTTTTTCTTATAACTAAAAAAAACCAATTAGATGCAACAAAAATAGAGAGTCT
GCTGATTTAAAATCATTGGAGTAAATCAATTTTAAATACTACTAAAGTTGCGATTTTCACCAATAAATAAGAATAATCAGAATTTCTAGTTATTCGATTA
TTGATATTGGTAAACGACCTAGAGCAATTTGATTATAATTTAATTCGTGACGATCATAAGTAGAAAGCTCATATTCTTCAGTCATTGATAAACAATTTGT
TGGGCAATACTCAACACAATTACCACAAAATATACAAATTCCGTATCAAATTCAAAGTGAATTCGACCACGAAAACGCTCCGATGTGATCAATTTCTCAT
AAGGATATTGAATAGTTACAGGTAAACGATTAGCGTGTCGGATTTCTAAATTCTCATAGGGACCTCCTGGAATTGCTTCTAGAGCTTGTTGAATAATTTT
TATAGATTCGGCCATTTCACCGATTCGTATTAAATAACCAGCAAGTCCTATTAAAAAATAATCACAAAAATCTAAACATTTCTCTATCCATCCATAAGGT
AGATCGGCAGCTACCCCTCCAATACGAAAATAATTATGCATCATTCTCATACCGGTGGCAGCTTCGAACAAATCATATATTAATTCCCTTTCTCTGAAAA
TATAGAAGAAGGGGGTTTGCGCCCCGATATCCGCCATAAAAGGGCCGAGCCATAATAAATGAGAAGCTATTCGACTTAACTCCAACATAATCACTCGAAT
ATAGCTAGCTCTTTTAGGTACTTGAATATTTCCCAATTGTTCTGGTCCATTTACAGTTATTGCTTCTGTAAACATAGTAGCTAAATAATCCCAACGTGTT
ACATAAGGCAGATGTTGTATAATTGTTCGGTTTTCTGCAATTTTTTCCATACCTCTGTGTAAATAACCTACTATTGGTTCACAGTCAATAACATCTTCAC
CGTCTAAAGTAACGATGAGTCGGAGAACACCATGCATTGATGGATGGTGAGGGCCCATATTGACTATCATGAAGTTTTTTCTGGTAGTTGGTACAGTCAT
AGGTTTTTCTCCGATTCATTCTTTCACAAATTCATTTTTGCATGAATTGCTAAAAACAACAAGGTATTCATCAAAATTCAAGATCTAATAAATCAAATAA
TTATAATTCAAAACAACTCTTCACATTAACGTGTTTTTACTTCTCGAATGTTCAATTGACTTATTAATTCTTTATAACATATTTCATTTTTCTTTGACAA
ATAAGCTAGCAGTCGTTGACGTTTTCCCAGAATTTTTCGTAGCCCTCGCTGAGATGAATAGTCTTTTTTGTGCAATTGGAAATGGGAAGTAAGTCTTCGT
ATCTTATTGGTAAAACCGACTACTTGAAATTCAACAGACCCTCTGTTTTCTTCTTTTTTTTTTCCTCCGAAATAACGGATA