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Detailed information on CNT30269286


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 5e-47

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700805Chenopodium quinoaQuercus lobata46.1210080.86303forward
CNT3021339Chenopodium quinoaCitrullus lanatus78.2381.0781.13514forward
CNT30727661Chenopodium quinoaCorchorus capsularis71.5475.0879.36470forward
CNT30708216Chenopodium quinoaGlycine max53.2762.6181.71350forward
CNT3091337Chenopodium quinoaSolanum tuberosum70.1756.580.04461forward
CNT3087851Chenopodium quinoaVigna radiata57.8441.5879.74380forward
CNT30508722Chenopodium quinoaSolanum lycopersicum70.1789.8680.26461forward
CNT30263848Chenopodium quinoaBrassica rapa63.4798.5880.82417forward
CNT3027877Chenopodium quinoaTheobroma cacao45.0574.9482.43296forward
CNT30551544Chenopodium quinoaOryza brachyantha68.865.0480.97452forward

Expression of CNT30269286

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MMEMWDCKMEMWGCMTEMWGCRLETWGCRLETWGCRLETWGCRLETWGCSLETWGCSLETWGCS*

Sequence

>CNT30269286
GTAATTTGGGGAGGTAGGGCTGTAGGGACTGGATGGTGATATTCTTGGGCTGCTTGGAGAGTATGCAAGTGATGGACTGTATTTGGCTGAAGGGTTATAG
CTTGGAGATGTAGGACTATAGCTAGGTGAAGTAGGACTATAACTTGGGGATGTAGGGCTATATCCTGGAGATGTAGGGCTGTAAGCAGGAGATGTAGGGC
TGTACGACGGAGAAGTAGGGCTGTATGATGGAGATGTGGGACTGTAAGATGGAGATGTGGGGCTGTATGACGGAGATGTGGGGCTGTAGGCTGGAGACGT
GGGGCTGTAGGCTGGAGACGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGCTTGGAGACGTGGGGCTGTAGCTTGGA
GACGTGGGGCTGTAGCTAGGAGATGTGGGGCTGTAGCTTGGAGATGTGGGGCTGTAAGATGGGCTGGTGGGTGAATATGCTGGGCTTGTAGGACTATAGC
CAGGAGACCCAGGACTGTAAGTCGGGGAAGTAGGGCTATATCCAGGAGAGGTTGGACTATATCCTGGAGAAGTTGGGCTATATCCAGGAGAAGTTGGGCT
ATATCCAGGCGAATTTGGTGAGAGATAAGCAGGAGATGAAGCAGGAGAGAAGGCCAT