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Detailed information on CNT30269270


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 6e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549166Chenopodium quinoaIpomoea triloba58.145.3980.33305forward
CNT30616515Chenopodium quinoaSesamum indicum92.3871.9680.21485forward
CNT30710529Chenopodium quinoaGlycine max55.8151.9583.28293forward
CNT3091732Chenopodium quinoaSolanum tuberosum76.3835.2181.05401forward
CNT30442780Chenopodium quinoaAegilops tauschii79.6252.7180.62418forward
CNT30625810Chenopodium quinoaDaucus carota62.8648.6783.03330forward
CNT30620207Chenopodium quinoaCajanus cajan62.6715.3180.85329forward
CNT30354623Chenopodium quinoaLactuca sativa65.1453.3580.41342forward
CNT30150463Chenopodium quinoaBrachypodium distachyon78.2946.7681.51411forward

Expression of CNT30269270

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MMEMWDCKMEMWGCMTEMWGCTMEMWGCTTERWGCRLETWGCRLETWGCSLETWGCSLETWGCS*

Sequence

>CNT30269270
TCTTGGGCTGCTTGGAGAGTATGCAAGTGATGGACTGTATTTGGCTGAAGGGTTATAGCTTGGAGATGTAGGACTATAGCTAGGTGAAGTAGGACTATAA
CTTGGGGATGTAGGGCTATATCCTGGAGATGTAGGGCTGTAAGCAGGAGATGTAGGGCTGTACGACGGAGAAGTAGGGCTGTATGATGGAGATGTGGGAC
TGTAAGATGGAGATGTGGGGCTGTATGACGGAGATGTGGGGCTGTACGATGGAGATGTGGGGCTGTACGACGGAGAGGTGGGGCTGTAGGCTGGAGACGT
GGGGCTGTAGGCTGGAGACGTGGGGCTGTAGCTTGGAGACGTGGGGCTGTAGCTTGGAGACGTGGGGCTGTAGCTAGGAGATGTGGGGCTGTAGCTTGGA
GATGTGGGGCTGTAAGATGGGCTGGTGGGTGAATATGCTGGGCTTGTAGGACTATAGCCAGGAGACCCAGGACTGTAAGTCGGGGAAGTAGGGCTATATC
CAGGAGAGGTTGGACTATATCCTGG