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Detailed information on CNT30269180


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 3e-72

BLAST vs NONCODE:
NONMTRT001605, E-value = 3e-36

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30202642Chenopodium quinoaHelianthus annuus58.1163.0284.33351forward

Expression of CNT30269180

Peptides detected in this lncRNA

>peptide 1 (43 aa)
TGNTVTLNGTHQDNLAGPNSQNTLGMDQTWVTQVVKPALTKDL*

>peptide 2 (40 aa)
MVILPPPRMFSEAELSLTACPAKEGEESAIVEEAIVKRAS*

Sequence

>CNT30269180
ACCGGCAACACGGTAACCCTCAACGGCACCCATCAAGATAACTTGGCAGGCCCAAATAGCCAAAATACTTTGGGCATGGATCAAACTTGGGTTACCCAAG
TAGTCAAGCCCGCCCTCACTAAAGATTTGTGACCCAGCCTTGAACCAAACGGCCTCGCCGAACTTAACTCCGTTACGGGCCAAGAGCTCGGGGAAAACAC
AGCCCAAAGCACCCAACATGGCCCATCTGCAGTGGATCACCTCAAGCTCACGGTTCTTAGCAAAGGTCTCTGGGAAATTCACCAGTGAGGTATGATGGGG
CCTCACCAGAGAATGGGCCCAAATACTTAACACGGTCTGGGCCGTACCATGGGCTTCCTGATGAAACATTTTTGGGCTTTCCTGCAGTTTTCCTCATGGT
GATCCTTCCCCCACCTAGGATGTTTTCAGAGGCGGAGCTAAGTTTAACTGCCTGCCCGGCCAAAGAAGGGGAAGAAAGTGCCATTGTTGAGGAGGCCATT
GTTAAGAGGGCGAGCTAAGAACTATAACAATTATGTAACAAGAATATTTTTTTTATGTTTGTTGAAGTGATGAAAATAAATGTAATAATATGGATTGTTT
TATA