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Detailed information on CNT30269143


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 3e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639185Chenopodium quinoaNymphaea colorata32.6959.4878.35254forward
CNT30515273Chenopodium quinoaJuglans regia33.7240.8781.3262forward
CNT30371945Chenopodium quinoaArabidopsis thaliana30.3754.8880.51236forward
CNT30380725Chenopodium quinoaManihot esculenta32.5642.8883.79253forward
CNT30403648Chenopodium quinoaBeta vulgaris32.4322.7288.89252forward
CNT30630495Chenopodium quinoaVigna unguiculata31.443.0379.51244forward
CNT30505774Chenopodium quinoaNicotiana attenuata22.2736.1984.39173forward
CNT30710396Chenopodium quinoaGlycine max14.5423.1184.96113forward
CNT3094391Chenopodium quinoaSolanum tuberosum19.4334.5584.11151forward
CNT3089114Chenopodium quinoaVigna radiata30.2424.4378.72235forward
CNT30171560Chenopodium quinoaTrifolium pratense30.7629.6582.85239forward
CNT30145740Chenopodium quinoaMedicago truncatula36.1634.9181.49281forward
CNT3061459Chenopodium quinoaArabidopsis lyrata28.4437.7180.09221forward
CNT30651207Chenopodium quinoaRosa chinensis17.6320.2486.13137forward
CNT30477818Chenopodium quinoaArabidopsis halleri21.8836.3279.41170forward
CNT30619829Chenopodium quinoaCajanus cajan39.2530.9380305forward
CNT30358694Chenopodium quinoaLactuca sativa31.6655.2882.11246forward
CNT30428061Chenopodium quinoaPapaver somniferum32.6917.7382.68254forward
CNT30725909Chenopodium quinoaLupinus angustifolius20.3328.1182.28158forward
CNT3049718Chenopodium quinoaCucumis sativus31.446.7481.56244forward

Expression of CNT30269143

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGRRVWLGLPWPYCLFGLVDVEGVWRRKKG

>peptide 2 (37 aa)
MVLAEEREDGEKSVAWVAMAILFVWIGGCGGSVEKKEG

>peptide 3 (42 aa)
HVLTNTLSTRVNLFRVNPIFWVQILNLSIWKYPVKLVLYLVL*

Sequence

>CNT30269143
CATGTTTTGACCAACACCCTGTCTACCAGGGTTAACCTTTTCAGGGTAAACCCCATCTTTTGGGTGCAAATATTGAACCTCTCCATTTGGAAATACCCTG
TAAAATTGGTACTTTATCTTGTACTTTGATCTTAGCCTTGTTCCAAGTGCTAAACATTGCTCTTTACGAGCCAATTTCAGCAAGTTTGGTCCTTCCCTCA
TAATTGCTGCACCACCTGTTGGCATTTCGAAGATTTGCTCCTTTGGTGATTCCCATGTGATCACGTAAAATTCCTCTACTTGCGCCTTCCTCAATAACCC
ACCTGTGCGTTAAATAACAATAACTAGTGAGTGTCCCAGACGATGCACCAAGTGTTATATTACATGTCTTAATCACAACACGAGTAACTTAATACTCGCG
ACACACCCTCATCATTTTTTTTAATTAAAAACTAGTGAGTGTCCCGGACAATGCTTACACATTACTAACACGAGTAGATATTATATTCTCAATACCTGTG
CTACCGGCGAAGATTGGAGAAGGGGTGTTAGGGTCTAATTCCGGAGGTGTGAAACCTTTGGGTGCCTCAGCTGCGGTCTCGGTAGTCTCGGCTGCTTTGC
CTTCAGCAGCGGCTGCACGGATGGAGAGGGTTGTTTGAAAGAGGAGGTGAGGCGGGGATCGATGGTTTTAGCGGAGGAAAGGGAGGATGGGGAGAAGAGT
GTGGCTTGGGTTGCCATGGCCATATTGTTTGTTTGGATTGGTGGATGTGGAGGGAGTGTGGAGAAGAAAGAAGGGAT