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Detailed information on CNT30268703


BLAST search results

BLAST vs Swiss-Prot:
sp|Q85FN2|ATPH_ADICA, E-value = 6e-29

BLAST vs NONCODE:
NONCQUT006914, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678068Chenopodium quinoaSetaria viridis24.6617.4190.94276forward
CNT30617713Chenopodium quinoaSesamum indicum31.6418.0689.83354forward
CNT30553466Chenopodium quinoaOryza glaberrima11.7125.192.37131forward
CNT30656987Chenopodium quinoaTriticum dicoccoides22.1619.2191.53248forward
CNT3017917Chenopodium quinoaZea mays24.46.5790.84273forward
CNT30609661Chenopodium quinoaGossypium raimondii23.1515.0786.87259forward
CNT30232563Chenopodium quinoaAnanas comosus23.157.5691.89259forward
CNT30689283Chenopodium quinoaTriticum urartu22.169.7891.94248forward

Expression of CNT30268703

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAFPRSSSEFRIVFAKISVLNPKLPADGQ*

Sequence

>CNT30268703
ACAACTGATGGTACCAAGAGATACAATATAGTTCAAAGATACAACATTCAAAGTATTTGATTATTATACATAAAATGAGATGACAACTGTTCAATGGCCT
TTCCGCGTAGTTCGTCTGAATTTCGAATAGTATTTGCTAAAATATCGGTATTAAACCCGAAACTCCCGGCGGATGGTCAGTGACCCAAGAAAACGAAATA
ATCGGTTACATTTTTCATATGATCTCCTCTTATAGATAAACTAAAAAATCGTTGTATTTTTTAACTTCTTTACTACTTCTAAATTCGAAATGATTTTTTT
TTTGAATTGAGATTCCCCACAAAAAGAATACTTAACTTATTGGAATAGAATTCCTAATTCCTAATTAGGTACTCGGTTTCATTTGAATTGCGAAATACTC
CTTTAGTTGCAACACTTCTCCCTCGAACTAAGAAGGGGAAGGAAGGAAGGAAGAAAGCGAGTGGGTAACGCGAATTCTTCATCCTCAAATGAAGTCCTTC
CCGCGTATTATTTTCTCAACGAATAAGTAATTCTGTAGGAGCAATTTTTCACTATAAATGTGAAAAAGCAACCTCCAAGTTCAAGACTAGAAAAGAAATA
CGTATTTCTTATATTTCTTTTTCTTTTCTCGAATTAAACAAAAGGATTCGCAAATAAAAGTGCTAATGCTACAACCAATCCATAAATTATTAAAGCTTCC
ATAAAAGCTAAACTAAGTAATAAAGTACCTCGTATTTTTACTTCTGCTTCGGGCTGTCTGGCAATACCTTCTACAGCTTGTCCAGCGGCAGTACCTTGAC
CAACTCCAGGTCCAATAGAAGCAAGCCCTACAACCAATCCAGCAGCAATAACGGAAGCAGCAGAAATCAGTGGATTCATGATAAGTTCCTCACACAAAAA
AAAATGGTTAATGATACAATCAACCAATGCATTATGACTTAATTATTCCATTGCTAATATTAATCCAGTCGAAATAACTAACAATGCCGAATTGAAAATG
GAAATAAGAATATTATTAAACCATTAGTTTTTGATTTAATCGGATACCGCTAGACTGTATGTATTTGTATATTTCCATGCTCGAAATAAAATAGATTATC
TTGATAGAACCTCTTAATC