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Detailed information on CNT30268101


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XGX4|RBS3_AMAHP, E-value = 4e-46

BLAST vs NONCODE:
NONCQUT001608, E-value = 2e-115

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535656Chenopodium quinoaEucalyptus grandis18.5735.884.36179forward
CNT30317063Chenopodium quinoaCorylus avellana19.7132.8783.16190forward
CNT30512567Chenopodium quinoaJuglans regia22.7252.3985.84219forward
CNT30508073Chenopodium quinoaNicotiana attenuata23.0319.8483.78222forward

Expression of CNT30268101

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MHCTLPPLLAREVTSTLLFLVTGKAEVDFKPLNGATMLA*

Sequence

>CNT30268101
AATTTGGCAAAATGTATGAAAGATTAATAGTTGATGACTGGCAAAAAAGGGAGATATCATTTATAATTAGGAAATAAATCAACTTTAAATATAACAATCA
CATCCCTCTATATGAACACATACATATTCTATTTGAATCCGGGATAAATGGAATTAATCACAAACAAGATAGCAAAAAACAATCAAACTAGTACCCAGCA
GGCTTGTAGGCAATGAAACTGATGCATTGCACTTGACGGTAGCTGTCGAATCCAATGATTCTGATGAAGGCGTTGGGGTAAGCCTTCTTGGCTTCCTCGA
GCTCGTTAACAACCTGGGTCGGGTCAGTGCAACCGAACATAGGCAACTTCCACATGGTCCAATATCGCCCATCATAGTATCCTGGTGACCTGTGGTTCTC
ACGGTACACAAATCCGTGCTACAAAAAATTAAAACATAAAATGTGTTAGCTATGTACATACGTAAATATGATATTTACCTATAGAAAATGTTAGCAATTA
ATATGAAACTTACCTCAAGCTCGAATTCTAAGCAAGGAACCCAACCCTTGTTAAGAAGGTATTGAACTTCACTAAGCAAAGACTCAGTGGTGAGTGGTGG
AAGGTAAGACAAGGTCTCGAACTTCTTCTTGCCAACTGGTGGCCATACTTGCATGCATTGTACTCTGCCTCCATTGCTAGCAAGAGAAGTAACATCAACG
TTGCTCTTCCTAGTAACAGGGAAAGCTGAAGTGGACTTCAAACCATTGAATGGTGCTACCATGTTAGCCTGAGCAGTGCTGGCAGTGGCCACGGAGGCAG
CGGCGTTCATCAAACTAGAAGCCATGGTTTTATGTAATTTGTTACTCACTCTAGCTTAGCTCTTTTCTTTTGATTACTTCTTTGTTGAATGAGTAATATT
GATGTATGTACGGTCCAATTTATAATAGTATGAAATAACTCAAGCTAATCTTCTAAGATGTATC