Detailed information on CNT30268034


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701193Chenopodium quinoaQuercus lobata55.2410.8886.13137forward
CNT30374000Chenopodium quinoaArabidopsis thaliana37.110.4889.1392forward
CNT30560173Chenopodium quinoaActinidia chinensis55.2415.1989.05137forward
CNT30313266Chenopodium quinoaCamelina sativa37.115.2893.4892forward
CNT30605341Chenopodium quinoaGossypium raimondii41.949.5395.19104forward
CNT30410959Chenopodium quinoaPapaver somniferum56.8515.8687.94141forward
CNT30572302Chenopodium quinoaVitis vinifera41.9415.0586.54104forward
CNT3028352Chenopodium quinoaTheobroma cacao43.1511.5790.65107forward

Expression of CNT30268034

Peptides detected in this lncRNA

>peptide 1 (41 aa)
KSSGKTQPNAPNMAHLQWITSSSRFLAKVSGSAESPAVSQP*

>peptide 2 (33 aa)
QKLGENTAQCTQHGPSAVDHFKLTVLSKSLWVS*

Sequence

>CNT30268034
CAAAAGCTCGGGGAAAACACAGCCCAATGCACCCAACATGGCCCATCTGCAGTGGATCACTTCAAGCTCACGGTTCTTAGCAAAAGTCTCTGGGTCAGCT
GAAAGCCCAGCAGTGTCCCAACCATAATCACCAGGGAATTCACCAGTGAGGGAAGGGGAGGATAGAGCCATTGTGGAGGAAGCCATTGTAAGAGAAGAGA
TACAAAAGAAAGTAGGAAATAAAAAGTAATAATAATAATGGAGTGGGG