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Detailed information on CNT30266631


BLAST search results

BLAST vs Swiss-Prot:
sp|P31155|METK1_PETCR, E-value = 1e-89

BLAST vs NONCODE:
NONPOPT000585, E-value = 2e-31

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673153Chenopodium quinoaSetaria viridis43.4958.1785.83381forward
CNT30641080Chenopodium quinoaNymphaea colorata62.160.7881.99544forward
CNT3021108Chenopodium quinoaCitrullus lanatus20.7811.0685.71182forward
CNT30381493Chenopodium quinoaManihot esculenta22.626.4486.87198forward
CNT30712486Chenopodium quinoaGlycine max61.5367.2979.96539forward
CNT30638840Chenopodium quinoaCapsicum annuum46.3547.5484.48406forward
CNT30190465Chenopodium quinoaSecale cereale19.4159.0388.24170forward
CNT30225701Chenopodium quinoaHordeum vulgare41.5571.5184.34364forward
CNT30349162Chenopodium quinoaEragrostis tef22.621.7388.38198forward
CNT3055164Chenopodium quinoaAmborella trichopoda48.436.8780.66424forward
CNT3022562Chenopodium quinoaPopulus trichocarpa22.612.6686.87198forward
CNT30113329Chenopodium quinoaFicus carica22.618.3887.88198forward
CNT30725315Chenopodium quinoaLupinus angustifolius22.619.6889.39198forward

Expression of CNT30266631

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MQLFYKHNAAILLLTKPPNNHISVSPTINLPANKEIEKERETKKTLILWPIQKHFIYSFWLESSCSLWRRSGHLLY*

>peptide 2 (51 aa)
MRSTNDETARWVKVEDGLLVKVLLWDNRLDHMLLQVSGNLIVGNSLIVLSRD

>peptide 3 (44 aa)
MTKRPDGLRWKMVFSSRYFSGITGLITCSFKSAAISSLVTVSSC*

Sequence

>CNT30266631
TCGGCAGCTGATCCCTTTCTAGCACTGTAAAAAAACATACATATGCAGCTCTTTTACAAACATAATGCTGCCATTTTACTACTAACAAAACCTCCCAACA
ACCACATTTCTGTTTCTCCAACAATCAACTTACCCGCAAACAAAGAAATAGAAAAAGAAAGGGAAACTAAAAAGACATTAATATTGTGGCCCATACAAAA
GCATTTTATATATTCCTTTTGGTTAGAGAGCAGCTGCAGCCTGTGGAGGAGATCCGGGCACTTGCTTTATTGATCAAAAATATTAATCAATGAATTCATA
GACTTCACTCGACTTCTCCGGTTTAAGCTTGGGGCTTCTCCCACTTGAGGGGCTTGACAGTCTCCCATGTGAAGTCTGCGTCGTCCCTACCGAAGTGTCC
GTAGGCGGCGGTCTTCAAGTACCTGCTGCCACCCTTTAGAAGGTCAAGGTTGATGGCAATCATACCGGGCCTGAAGTCGAAGGTCTCCTTGACAATCTTG
AGGATCTCTTTGTCTGGGATCTTTCCGGTTCCGTAGGTGTCAACGAACACAGACAAGGGCTCGGGGACACCAATGGCGTAAGAGATCTGGACAATGCAGC
GGCGAGCAAGGCCAGCAGCAACAATGCTCTTGGCTGCCTGCCTGGCGATGTAAGCACCACTCCTGTCAACCTTGGTTGGGTGTCGATGATGATCTTACGG
CCGGTAAGACCAGCATCACCATGAGGTCCACCAATGACGAAACGGCCAGATGGGTTAAGGTGGAAGATGGTCTTCTCGTCAAGGTACTTCTCTGGGATAA
CAGGCTTGATCACATGCTCCTTCAAGTCAGCGGCAATCTCATCGTTGGTAACAGTCTCATCGTGCTGAGTAGAGAT