Detailed information on CNT30265527


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618174Brassica rapaSesamum indicum18.8326.8586.21116forward
CNT3021397Brassica rapaCitrullus lanatus20.4519.0384.92126forward
CNT30237104Brassica rapaBrassica oleracea31.1759.2691.67192forward
CNT30435344Brassica rapaAegilops tauschii24.0347.5985.14148forward
CNT30611949Brassica rapaArabis alpina19.1634.189.83118forward
CNT30136247Brassica rapaLolium perenne24.0348.3784.46148forward
CNT30624589Brassica rapaDaucus carota16.8820.9790.38104forward
CNT30721658Brassica rapaTriticum spelta33.2849.484.88205forward
CNT30619808Brassica rapaCajanus cajan29.3830.4284.53181forward
CNT30597159Brassica rapaOryza meridionalis33.2828.3185.37205forward
CNT30570286Brassica rapaVitis vinifera29.0636.3888.83179forward
CNT30106559Brassica rapaOryza longistaminata10.5529.0286.1565forward
CNT30147962Brassica rapaBrachypodium distachyon32.3158.785.93199forward
CNT30333509Brassica rapaCynara cardunculus25.6528.7384.18158forward

Expression of CNT30265527

Peptides detected in this lncRNA

>peptide 1 (46 aa)
NINPNRESTTIEIQKEINRISSLKKTKGSSQECFEPIHANTKDNRI*

>peptide 2 (29 aa)
MRSNLWSILENTSATLVELEIIHTAQRQR*

Sequence

>CNT30265527
AATATAAACCCAAATAGAGAGAGTACCACAATAGAAATTCAAAAAGAAATAAATCGGATAAGTAGTTTGAAAAAAACAAAGGGCTCGTCACAAGAGTGTT
TCGAACCCATTCACGCAAACACAAAGGATAACAGAATTTAACATTTCGAAACTTTATTCTTCTCAGTACTCCTCGCCTTCGTCATCCTCATCATCGCCAC
CTTCAGCACCAACCTCCTCATAATCCTTCTCAAGAGCTGCAAGATCCTCACGAGCCTCAGAGAATTCTCCTTCCTCCATACCCTCACCCACATACCAGTG
AACGAAAGCACGCTTGGCGTACATGAGATCGAACTTGTGGTCAATCCTCGAGAACACCTCAGCAACACTCGTGGAGTTGGAGATCATACACACAGCTCAA
CGACAGAGGTAGAGACCTGTGGAGATGGGTAAACAGTGAACCCGAGCTTGGACTTTTTCCCGTAGTCGACAGAGAGCCTCTCGAGAAGAAGTGATCCAAG
ACCAGATCCAGTACCTCCTCCAACGGCGTTGAAGACAAGGAACCCTTGGAGACCAGTGCAGTTATCAGCAAGCTTCCTGATACGGTCCAAACACAGATCA
ACAATTTCCTTCCCAA