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Detailed information on CNT3026527


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532384Populus trichocarpaEucalyptus grandis88.0258.0784.19860forward
CNT30516063Populus trichocarpaJuglans regia93.049282.73909forward
CNT30701594Populus trichocarpaQuercus lobata91.386.9483.52892forward
CNT30274489Populus trichocarpaChenopodium quinoa91.573.0483.89894forward
CNT3019912Populus trichocarpaCitrullus lanatus92.2253.9282.8901forward
CNT30379426Populus trichocarpaManihot esculenta92.4377.9884.5903forward
CNT30525141Populus trichocarpaPhaseolus vulgaris89.6650.6183.22876forward
CNT30488054Populus trichocarpaOlea europaea64.7973.6985.62633forward
CNT30709517Populus trichocarpaGlycine max77.0781.0584.99753forward
CNT30156153Populus trichocarpaPistacia vera92.8478.7384.79907forward
CNT30637458Populus trichocarpaCapsicum annuum92.3220.5484.26902forward
CNT3095105Populus trichocarpaSolanum tuberosum93.2478.484.74911forward
CNT30538027Populus trichocarpaBrassica napus88.6445.6883.26866forward
CNT30238962Populus trichocarpaBrassica oleracea92.0246.5182.87899forward
CNT30310997Populus trichocarpaCamelina sativa92.0277.983.87899forward
CNT3061767Populus trichocarpaArabidopsis lyrata88.6453.0382.91866forward
CNT30460578Populus trichocarpaSaccharum spontaneum89.5643.7383.54875forward
CNT30609009Populus trichocarpaGossypium raimondii87.2189.3182.86852forward
CNT30217449Populus trichocarpaKalanchoe fedtschenkoi86.856.284.32848forward
CNT30652253Populus trichocarpaRosa chinensis92.5369.6585.95904forward
CNT30623040Populus trichocarpaDaucus carota88.9578.2284.12869forward
CNT30480747Populus trichocarpaArabidopsis halleri92.4377.8483.94903forward
CNT30423866Populus trichocarpaPapaver somniferum90.8969.4383.67888forward
CNT30706355Populus trichocarpaPrunus avium92.8459.0185.45907forward
CNT30642981Populus trichocarpaCannabis sativa88.6477.1883.26866forward
CNT3028051Populus trichocarpaTheobroma cacao89.2571.5383.72872forward
CNT30326890Populus trichocarpaAsparagus officinalis92.4373.1883.39903forward
CNT30330420Populus trichocarpaDioscorea rotundata91.8153.0183.05897forward
CNT30111690Populus trichocarpaFicus carica88.9577.9483.43869forward
CNT30726149Populus trichocarpaLupinus angustifolius90.7946.5983.88887forward
CNT3050777Populus trichocarpaCucumis sativus87.7288.2684.95857forward

Expression of CNT3026527

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRSTK*

>peptide 2 (52 aa)
MSLCWSGGMPSLSWILALTLSMVSELSTSKVMVFPVKVFTKICIPPRRRSTK*

>peptide 3 (61 aa)
MSLCWSGGMPSLSWILALTLSMVSELSTSKVMVFPVKVLTKICIPPLSRSTKWRVDSFWML*

>peptide 4 (88 aa)
MKGGLLLDVVISESAPILKLLASKDEPLLVWRDALFILDFSLDIINGVGALHLQGDGLPSQSLHKNLHTTTKAEHQVKGGFLLDVVVS*

>peptide 5 (72 aa)
PSNNSRLHQLGHKHLTIEDHHQLRNHRGDEAQGVEWTPSVCCNLPGSFHLQAASQQRSVSAGLVESPPCPGF*

Sequence

>CNT3026527
CCATCCAACAATAGCCGGTTACACCAACTGGGACACAAACACCTGACCATAGAGGATCATCACCAGCTTAGAAACCACCGCGGAGACGAAGCACAAGGTG
TAGAGTGGACTCCTTCTGTATGTTGTAATCTGCCAGGGTCCTTCCATCTTCAAGCTGCTTCCCAGCAAAGATCAGTCTCTGCTGGTCTGGTGGAATCCCC
TCCTTGTCCTGGATTTTAGCCTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAGGGTGATGGTTTTTCCAGTCAGGGTCTTGACAAAGATTTGCA
TTCCTCCACGAAGGCGAAGCACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCGAGAGTGCGCCCATCCTCAAGTTGCTTGCCAGCAAAGAT
GAGCCTCTGTTGGTCTGGAGGGATGCCCTCTTTATCTTGGATTTTAGCCTTGACATTATCAATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTCTTC
CCAGTCAAAGTCTTCACAAAAATTTGCATACCACCACGAAGGCGGAGCACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGAGTACGTC
CATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCCTTATCCTGGATTTTGGCCTTGACATTATCAATGGTGTCGGA
GCTCTCCACCTCCAAGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAGATCTGCATACCACCTCTAAGTCGAAGCACCAAGTGGAGGGTGGACTCCTTC
TGGATGTTGTAGTCAGCGAGTGTGCGTCCATCCTCTAGTTGCTTCCCAGCAAAGATCAACCTTTGCTGATCTGGGGGAATCCCTTCCTTGTCCTGGATCT
TAGCTTTTACATTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAA