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Detailed information on CNT30264591


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380061Brassica rapaManihot esculenta12.9322.8184.8886forward
CNT30544306Brassica rapaBrassica napus24.0645.8587.5160forward
CNT30479805Brassica rapaArabidopsis halleri14.5931.9192.7897forward

Expression of CNT30264591

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MTVSKLFPKGSLRCFERFSTGPQLAPYLFKASGMMQPAAPNIAHLA*

Sequence

>CNT30264591
TACATAATATAAATTATTTTCGTAACAGAAAATGGTGACAGTTTAGGATAGAATTTATCTGTAATAATATAATCACTAAAAATCAAAATAAAACCGAATG
ATGAAATATGTATATGACTAAACGCAAACGCACCATCAGATGGTTATCCTTAGAAGCAATAATTAAGTAACATTGGAATATATCAAGAAGATGCAGATGG
AAGTTTTTTTCACAATGTCAACAGAAACTCTCATCAAACAAAGTGTACAAAGCATCTTCGAAGCTCCTTAAAATGAGAAATGTCTTAGAGAGTGGGAGCT
CTCTCAGCAGTACCAGCGATGACGGTAAGCAAATTGTTTCCGAAAGGATCACTTAGATGTTTTGAAAGGTTCTCAACAGGGCCACAGTTAGCGCCATATT
TGTTTAAGGCTTCAGGGATGATGCAACCAGCTGCTCCCAACATAGCCCATCTCGCGTGAATCAGTTCAAAGGCTTGGTATCTGAACAACCACATTCATTA
CAAAACCAGTCTCAATGTCATTGTTCATATTTTGAAAGATAGAGAACCAAAAACAGGGATGTTAAAAAAAAATAAAAAAAAATAAACAGGATTAGAGAAG
AGAATCTGCTTACTTAGCGAAGTTCTCAGGCTTCTTGCCAAGTCCAAATGGGTCATAGCCATAGC