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Detailed information on CNT30264219

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3061832	Brassica rapa	Arabidopsis lyrata	22.11	36.16	89.19	111	forward
CNT30322408	Brassica rapa	Asparagus officinalis	22.11	12.77	81.98	111	forward

Expression of CNT30264219

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MTVSKLFPKGSLRCFESEHGKHGQSPVLDLFNLEKSSLFRVFSKSQRVEWASWVKLVFE

>peptide 2 (35 aa)
MENMANLPFLISLTLRRAPCSGSLASPKGSNGPPG*

Sequence

>CNT30264219
ACTAGAGTACATAATATAAATTATTTTCGTAACAGAAAATGGTGACAGTTTAGGATAGAATTTATCTGTAATAATATAATCACTAAAAATCAAAATAAAA
CCGAATGATGAAATATGTATATGACTAAACGCAAACGCACCATCAGATGGTTATCCTTAGAAGCAATAATTAAGTAACATTGGAATATATCAAGAAGATG
CAGATGGAAGTTTTTTTCACAATGTCAACAGAAACTCTCATCAAACAAAGTGTACAAAGCATCTTCGAAGCTCCTTAAAATGAGAAATGTCTTAGAGAGT
GGGAGCTCTCTCAGCAGTACCAGCGATGACGGTAAGCAAATTGTTTCCGAAAGGATCACTTAGATGTTTTGAAAGCGAACATGGAAAACATGGCCAATCT
CCCGTTCTTGATCTCTTTAACCTTGAGAAGAGCTCCTTGTTCAGGGTCTTTAGCAAGTCCCAAAGGGTCGAATGGGCCTCCTGGGTGAAGCTTGTCTTCG
AA