Detailed information on CNT30263808


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378978Brassica rapaManihot esculenta30.2412.2185140forward
CNT30539322Brassica rapaBrassica napus69.3351.03100321forward
CNT30234848Brassica rapaBrassica oleracea69.3349.9299.69321forward
CNT30479924Brassica rapaArabidopsis halleri33.6959.0987.82156forward
CNT30337328Brassica rapaCynara cardunculus29.3720.2186.03136forward

Expression of CNT30263808

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSKILQRSLTSDNSLNKESKHREHSQSSDL*

Sequence

>CNT30263808
TAACAAAAAAACATAAATCCATTTCCATTTAGTTCTACGACACAGTTGATAAGACAAAGAGTTATTGGATTAATGTTAAATCATACAAATACTTGCAAAT
TTTACATCTAAACAACATCTCTTTCTCCTCTTACACTCACAAGAAGCAAATACTGAAGCAAATTACAGATAAAAACATCGCTCACTTTCCGGGAACGAAG
TTGGTAGCAAAGGCCCATGCATTGTTGTTAACTGGATCAGCCAAATGGTCAGCAAGATTCTCCAAAGGTCCCTTACCAGTGACAATAGCTTGAACAAAGA
ATCCAAACATAGAGAACATAGCCAATCTTCCGACTTGTGATGCGGCTGGGGAAAGCGTGACGGCTGGTCCGGCGAAGGCAGGGGAGGAGAGAGCCATTGT
TGAGGCGGCCATTGCGGTTGAGTGCTGAGCAAAATAAAACGTTTATTGGTTGTTGTTTGTGAG