Detailed information on CNT30263158


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375299Brassica rapaArabidopsis thaliana34.7822.5195.4588forward
CNT30236705Brassica rapaBrassica oleracea62.4533.5596.84158forward
CNT3076072Brassica rapaBrassica juncea62.8523.31100159forward
CNT30612587Brassica rapaArabis alpina30.8321.6187.1878forward
CNT30219526Brassica rapaKalanchoe fedtschenkoi32.8119.8684.3483forward
CNT3034379Brassica rapaTheobroma cacao28.469.2387.572forward

Expression of CNT30263158

Peptides detected in this lncRNA

>peptide 1 (38 aa)
TASIAHLQWMSSDSLYLSRFSGTSPSPSGNSGGDELRL*

Sequence

>CNT30263158
AACAGCGAGCATAGCCCATCTACAGTGGATGAGCTCTGATTCTTTGTACCTCTCAAGGTTCTCTGGAACCTCTCCAAGTCCAAGTGGGAACTCCGGCGGA
GACGAACTTAGACTTTGAAGAAGAAAGAAGAGAAGGGTAGACGGCGGCGATGCCGCAGCTCATGAGCGAGTTCGACGCCATTGTTCTCTCTCTCTAACTC
CCTTTCTGTTTACCACAAAGAAGAAAGATGTGAACGAGAGAGAGGTGTTTTGG