Detailed information on CNT30262985


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9C7S5|PSYR1_ARATH, E-value = 3e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30559962Brassica rapaActinidia chinensis40.1921.5481.4129forward
CNT30237021Brassica rapaBrassica oleracea76.0199.5996.72244forward

Expression of CNT30262985

Peptides detected in this lncRNA

>peptide 1 (70 aa)
KPLTKITFFANSLFVSVSASSPLMFRLCQAHEASLFRDHSLSATDQTPPLVSLPFSSDSPTRLFLSTSSV*

Sequence

>CNT30262985
CCAAACCTTTGACAAAAATCACTTTTTTCGCAAATTCTCTCTTCGTCTCCGTCTCTGCTTCCTCTCCATTGATGTTTAGGCTATGTCAAGCACACGAAGC
ATCTCTCTTTCGTGACCACTCTCTCTCAGCAACGGATCAAACACCTCCTCTGGTTTCTCTTCCCTTCTCATCTGATTCACCCACGCGACTATTTCTCTCG
ACATCTTCGGTCTGAACACCTCCATTGGTCTTTTCCCCGTGAGTAGCTCGAGCATCACGACGCCAAAACTGTACACGTCACCTCTCAGAGTGGCTACCCA
CGCTTGTCCGTACTCCGGGGG