Detailed information on CNT30262041


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200314Brassica rapaPisum sativum20.9827.7187.564reverse complement
CNT30506770Brassica rapaNicotiana attenuata22.322.388.2468forward
CNT30538639Brassica rapaBrassica napus97.798.0397.99298forward
CNT30235726Brassica rapaBrassica oleracea98.0397.7191.64299forward
CNT30510805Brassica rapaSolanum lycopersicum25.925.986.0879forward
CNT30212924Brassica rapaHelianthus annuus45.2545.2584.06138forward

Expression of CNT30262041

Peptides detected in this lncRNA

>peptide 1 (61 aa)
SSSVAWAYNPCGDNRMIGRWVDLVGPGLLGLLWPARSRLGVEACGLSEGFSHVFLKVGETA*

Sequence

>CNT30262041
GTCGAGCTCGGTAGCGTGGGCTTATAATCCATGTGGAGACAATAGGATGATAGGACGTTGGGTCGATCTCGTTGGGCCGGGTTTGTTGGGCTTATTATGG
CCTGCCCGTTCCAGGTTAGGAGTTGAGGCATGCGGCTTGAGCGAAGGCTTTAGTCACGTGTTTCTTAAAGTGGGGGAGACTGCGTGAGGTTGGTTTCACA
GAGCAGCGTACACCTCCCGCTCTTGACGGTGGAAGGATAACGGGCCTTCGCCTGCCGAGCCTTACTATGACCCAATAAGCTGATTCCGATTGGACCAATT
TTTTT