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Detailed information on CNT30262


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 2e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30356274Zea maysLactuca sativa28.421.7883.1142forward
CNT30148662Zea maysBrachypodium distachyon39.625.7192.42198forward
CNT30174623Zea maysVigna angularis27.816.3181.29139forward

Expression of CNT30262

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MHISNHATTVPAAKLQYTVINRRRSSLIWIPAGACGVREV*

>peptide 2 (47 aa)
GVMLCKKQANEHVNIRRDLVIKLHKDHHAHLKSCHHRTSSQITIYCN*

Sequence

>CNT30262
AGGCGTTATGTTATGCAAGAAGCAAGCAAATGAACATGTAAATATAAGAAGAGACTTGGTAATAAAATTACACAAGGATCATCATGCACATCTCAAATCA
TGCCACCACCGTACCAGCAGCCAAATTACAATATACTGTAATTAATAGAAGAAGAAGTTCTTTAATTTGGATCCCGGCTGGGGCGTGCGGCGTACGTGAA
GTGTGATTAGTCGAAGGTGGCCTTGCCGGTGAACTTGACGTCGATGGGGTTGACGTACTGCACCTCGCCGTTGGGGAAGACGCGGTAGAACTGGTAGGTG
ATCTTGTACTTGGAGCGCAACCTGGTGCCGAGCGCCAGGCACTGCTCCTTGCGCGCCAGCTTCAAGAGGTTGGGGCCCTCCCGCATGATGGCGGCGCCGC
CGGTGGGCATCTCGAACACCTGCTCCTTGGGGGACGTCCACGTGATGACGTAGAACTCCTCCACCTGCGCCTTGCGGAGCAGCCCGCCCGTGCTGCCGCC