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Detailed information on CNT30261401


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30234423Brassica rapaBrassica oleracea11.9621.7794.34106forward
CNT3078045Brassica rapaBrassica juncea23.0254.2687.75204forward

Expression of CNT30261401

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDPQLTLNLYLSNHVFIKIMFIILQMLIIV*

>peptide 2 (36 aa)
MPRSASTLGFSGVYIPSYASFSLLATVTGEYSRVRF*

Sequence

>CNT30261401
ATTTAGATATTAATTTATACTGTTCATAATAGAATAATAAATTAATGTCAAAAACTTCGGTATCCTTTTCTTGCTAATTTCTTTAGAGCTGGCAAAATGT
TAGTGCAAAGGCCCAAACTATAGTATAAAAAACATAACAAGAGAAACCCAATAAGAAACATTACATGGGCTTAACATAAATGCCCAGGTCTGCCTCAACC
CTAGGGTTTTCAGGGGTATATATTCCGAGTTACGCTTCCTTCTCTCTTCTTGCTACCGTCACCGGGGAATATAGCCGAGTAAGGTTTTGAGAAAAAGAGT
TCCTCCGCAATGAGAGCCAAGTGGAAGAAGAAGCGTATGAGGAGGTTGAAGATGAAGAGACGAAAGATGAGACAGCGATCTAAGTAGACAGAGAGTGACT
CCTCTCTTGAAGACTTCGCTTTCCAGTTATTTCATTTCGCTAAGTACTTTTGTTTTGATTTTGTTTCAGTTTTAAGTGTTCTTGTCTTCGTTTTTGTCGG
ATTGTATGGATCCTCAATTAACGTTAAATCTTTATCTTTCTAATCATGTTTTCATTAAAATAATGTTTATCATCTTGCAAATGCTAATTATCGTGTAGAT
CTTTATTGAATCCCTCAGATTTAGATTATATACGCTTAGAATATACAAGCCTTGTTTTGGTTAGGAAGAAAACGTAACCTACACGTAACACTTTGTTAGG
TTATATACACTTAGAAAACGTAACACCAATAGTGTTTAACTTCTCGCAAATGCTAATCTTCGTTTAGATCTTATGGAATATCTCGGATTTAGGTTACTTA
ATTTAGAATATACAAACATTGTTTTGTTTAGGAAGAAAACGTAACCTACACGTAACGCTTGTGAACAAATAATGCGATCTGTGTAT