Detailed information on CNT30261151


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373911Brassica rapaArabidopsis thaliana90.2692.9888.85278reverse complement
CNT30540482Brassica rapaBrassica napus10010099.68308forward
CNT30235538Brassica rapaBrassica oleracea10010093.51308forward
CNT3060682Brassica rapaArabidopsis lyrata100.32100.3286.08309forward
CNT30612441Brassica rapaArabis alpina86.6986.6986.52267reverse complement

Expression of CNT30261151

Peptides detected in this lncRNA

>peptide 1 (29 aa)
SSSVTRACDPCGDYRVMGRLIDLIGPGSG*

Sequence

>CNT30261151
GTCGAGTTCAGTAACGCGGGCTTGTGATCCATGTGGAGACTATAGGGTGATGGGACGCTTGATCGATCTTATTGGGCCGGGTTCGGGTTGAGCTTTATTC
TGGCCTGCCCATACCAAGTTGGGAGTTGAGGCATGGTTCCTGAGCGAAGGCTCGGGTGCTGTGTCTCTTAGAGTGGGGGAGACTGCGTGAGGCTGGTTTC
ACAGAACAGCGTTTCACCTCCCACTCTCAACGGTGGAAGGATAACGGGCCATTGCCTTCCGAGCCCACTATGACCCAATAAGCCGATTCCGATTGGACCA
TCATTTTT