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Detailed information on CNT30261121


BLAST search results

BLAST vs Swiss-Prot:
sp|P13851|CB21_SINAL, E-value = 2e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30543163Brassica rapaBrassica napus74.0161.7897.32299forward

Expression of CNT30261121

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLQWITSSSRFLANVSGSAERPAVSQP*

Sequence

>CNT30261121
TAGTCGAGTCCTCCTTCACTGAAGATCTGTGAACCGGCCTTGAACCAAACGGCTTCTCCGAACTTGACTCCGTTACGAGCCAAGAGCTCAGGGAAAACGC
AGCCTAGGGCTCCGAGCATGGCCCACCTGCAGTGGATAACTTCTAGCTCACGGTTCCTGGCGAATGTCTCGGGGTCGGCTGAGAGACCGGCGGTGTCCCA
GCCGTAGTCTCCTGGGAACTCTCCGGTAAGGCAGGGGAGGAGAGAGCCATGGTTGAGGCAGCCATTAGAACGTTTCTTCTTTTTTGTTGATTTTATGGGT
TTTTTTTTGTGACTGGTGAGAGTGATTGAAACAGGTTGGGGTATAGATCGGTTTTATAGAATTCTCAAGAGTAAGGTTTGTTATCTGTGCAATATCTGTA
TCTG