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Detailed information on CNT3025970


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZG8|MIK2_ARATH, E-value = 3e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30146611Populus trichocarpaMedicago truncatula17.7829.6984.8125forward

Expression of CNT3025970

Peptides detected in this lncRNA

>peptide 1 (40 aa)
QQMMSNWMSQALRAWLCRSQRHEPHILNPKEHCCWKCLYE*

Sequence

>CNT3025970
GCCAGCAAATGATGTCCAATTGGATGAGTCAGGCATTAAGAGCCTGGCTGTGCCGAAGTCAGAGACATGAGCCTCATATTCTGAATCCAAAAGAACATTG
TTGCTGGAAATGTCTCTATGAATAATCGGAGGAGAGCAGTCATGGTGCATGTAGGATAAAGCATTGGCTACGCCTTCGATAAGATTCATCCTTTTATCCC
AATCCATATTTGCTGCTTGTTCCTCGTCGTTCAATACCTTTCTTAAACTTCCCCTTTCCACAAATTCATATACCAAAAATGAGTGTTTGGCATGCGAGCA
GAAACCATACAGCTTCACAATATTTCGATGCCGTATACCCATTAAGACATCAATCTCGCTTCTAAAAGCTTTCAAGCTGCTCATCTCAACTTCTGGTGTT
TGGTGAAACTTCTTCACGGCAAGGACTTGTTCTGATGGAAGTACAGCTTTGTAAACAACTCCATACCCTCCTGTACCAATGCAATATTCGGAGTTGAATT
CCTCAGTAGCCTCAATGATGTCCTCGTAGCGCAGTTCCCCACCAGTGCACCATCTCGCGGGAACATCTCTTTGAGGTGTTTCCATTAACCTTTTCTTTCT
TCCGCTTTGGAAAAAGATAAGGAAACCTACAATCAGGCCCAACAAACTACCCAGCAGAGAAAATACAGTCAAAATGATAACTGTGGGGCCCTTCTTGTGC
ACA