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Detailed information on CNT3025914


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639807Populus trichocarpaNymphaea colorata100.2293.1696.721798forward
CNT30318212Populus trichocarpaCorylus avellana100.1766.8597.831797reverse complement
CNT30519047Populus trichocarpaJuglans regia100.1792.9697.721797forward
CNT30702609Populus trichocarpaQuercus lobata100.1797.6697.611797forward
CNT30283192Populus trichocarpaChenopodium quinoa100.1185.2897.221796reverse complement
CNT3021658Populus trichocarpaCitrullus lanatus98.8399.8998.141773reverse complement
CNT30632349Populus trichocarpaVigna unguiculata100.1174.1597.331796forward
CNT30200773Populus trichocarpaPisum sativum100.1161.1397.161796forward
CNT30506608Populus trichocarpaNicotiana attenuata99.6169.5395.911787forward
CNT3047196Populus trichocarpaPrunus dulcis100.1175.1897.161796forward
CNT30638988Populus trichocarpaCapsicum annuum99.8394.0297.431791reverse complement
CNT30544406Populus trichocarpaBrassica napus100.1190.1296.991796forward
CNT30309594Populus trichocarpaCamelina sativa100.1793.0197.051797reverse complement
CNT3083352Populus trichocarpaBrassica juncea100.1197.8297.051796reverse complement
CNT30422282Populus trichocarpaPapaver somniferum100.2256.9797.271798reverse complement
CNT30326143Populus trichocarpaAsparagus officinalis100.2858.4197.171799forward
CNT3036478Populus trichocarpaCucumis melo98.2257.9698.071762forward

Expression of CNT3025914

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MMRRQHEGRAIRRVIMNHQSNGQSPRRPFI*

>peptide 2 (43 aa)
MIRFSGLLATSPAANRPRRRDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 3 (32 aa)
MKYECPRLSLLIITPIPKANTIGSKSYDVIPC*

>peptide 4 (49 aa)
DPSAGSPTETLLRLLLPLNDKVQWTSRDVAGGEPPTSPRSEHFTGPFNR*

>peptide 5 (61 aa)
MKFQRLPGPVGQGYRLVEYISVARVRPRTSKGITDLLLPQTSLAWKAIVPLRSWPRRVTSA*

>peptide 6 (44 aa)
MRPFQKSGFVARISSRITTVIRVANTIKQTITDLMSHSQFHSLN*

>peptide 7 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQHNRIEIL*

Sequence

>CNT3025914
TGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCCGGCGGCGAA
CCGCCCACGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCT
GATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGC
CAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCT
GGAAGGCCATAGTCCCTCTAAGAAGCTGGCCGCGGAGGGTCACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACA
AATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTGCATCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTC
CCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCAGAACC
CAAAAACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTAAAAGCAACATCCGCCAATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCT
GATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACC
TCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGATGTTATCCCA
TGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCACCGGAGGCACGACCCGGCCAGTTAAGGCCAGGAGCGCAT
CGCCGGTAGAAGGGACGAGGCGACCGGTGCACACCTGAGGCGGACCGGCCGACCCAACCCAAAGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAAT
ATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCA
GACTCGAAGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT
TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATT
TGAATGATGCGTCGCCAGCACGAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAA
TGCGTCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAAATACCATCAAACAAACTATAACTGATTT
AATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATC